==27229== Memcheck, a memory error detector ==27229== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27229== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27229== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==27229== Parent PID: 24649 ==27229== ==27229== ==27229== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27229== Open file descriptor 12: ==27229== at 0x102CA0BD: pipe (pipe.c:29) ==27229== by 0x1A4A007D: ??? ==27229== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27229== by 0x10BC5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27229== by 0x10B5ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27229== by 0x10D4CD38: PetscInitialize (pinit.c:924) ==27229== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27229== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27229== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27229== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27229== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27229== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27229== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27229== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==27229== ==27229== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27229== at 0x102CEA5C: __open_nocancel (open64_nocancel.c:39) ==27229== by 0x10252B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27229== by 0xFB1B822: ??? ==27229== by 0xFB1B96F: ??? ==27229== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27229== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27229== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27229== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27229== by 0x10BC5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27229== by 0x10B5ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27229== by 0x10D4CD38: PetscInitialize (pinit.c:924) ==27229== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27229== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27229== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27229== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27229== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27229== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27229== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27229== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==27229== ==27229== Open file descriptor 145: ==27229== ==27229== ==27229== Open file descriptor 142: ==27229== ==27229== ==27229== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==27229== ==27229== ==27229== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27229== ==27229== ==27229== ==27229== HEAP SUMMARY: ==27229== in use at exit: 35,142 bytes in 286 blocks ==27229== total heap usage: 3,842,747 allocs, 3,842,461 frees, 3,181,059,998 bytes allocated ==27229== ==27229== LEAK SUMMARY: ==27229== definitely lost: 0 bytes in 0 blocks ==27229== indirectly lost: 0 bytes in 0 blocks ==27229== possibly lost: 0 bytes in 0 blocks ==27229== still reachable: 56 bytes in 3 blocks ==27229== suppressed: 35,086 bytes in 283 blocks ==27229== Reachable blocks (those to which a pointer was found) are not shown. ==27229== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27229== ==27229== For lists of detected and suppressed errors, rerun with: -s ==27229== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)