==27346== Memcheck, a memory error detector ==27346== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27346== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27346== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==27346== Parent PID: 24649 ==27346== ==27346== ==27346== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27346== Open file descriptor 12: ==27346== at 0x1030E0BD: pipe (pipe.c:29) ==27346== by 0x1A4A007D: ??? ==27346== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27346== by 0x10C07418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27346== by 0x10BA0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27346== by 0x10D4CD38: PetscInitialize (pinit.c:924) ==27346== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27346== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27346== by 0x213584: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27346== by 0x20AE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27346== by 0x20EAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27346== by 0x20E948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27346== by 0x20EFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27346== by 0x209275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==27346== ==27346== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27346== at 0x10312A5C: __open_nocancel (open64_nocancel.c:39) ==27346== by 0x10296B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27346== by 0xFB1B822: ??? ==27346== by 0xFB1B96F: ??? ==27346== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27346== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27346== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27346== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27346== by 0x10C07418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27346== by 0x10BA0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27346== by 0x10D4CD38: PetscInitialize (pinit.c:924) ==27346== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27346== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27346== by 0x213584: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27346== by 0x20AE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27346== by 0x20EAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27346== by 0x20E948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27346== by 0x20EFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27346== by 0x209275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==27346== ==27346== Open file descriptor 145: ==27346== ==27346== ==27346== Open file descriptor 142: ==27346== ==27346== ==27346== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==27346== ==27346== ==27346== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27346== ==27346== ==27346== ==27346== HEAP SUMMARY: ==27346== in use at exit: 35,174 bytes in 287 blocks ==27346== total heap usage: 18,911,860 allocs, 18,911,573 frees, 28,853,573,853 bytes allocated ==27346== ==27346== LEAK SUMMARY: ==27346== definitely lost: 0 bytes in 0 blocks ==27346== indirectly lost: 0 bytes in 0 blocks ==27346== possibly lost: 0 bytes in 0 blocks ==27346== still reachable: 88 bytes in 4 blocks ==27346== suppressed: 35,086 bytes in 283 blocks ==27346== Reachable blocks (those to which a pointer was found) are not shown. ==27346== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27346== ==27346== For lists of detected and suppressed errors, rerun with: -s ==27346== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)