==26444== Memcheck, a memory error detector ==26444== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26444== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26444== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMesh -malloc_debug -malloc_dump -memory_info ==26444== Parent PID: 24649 ==26444== ==26444== ==26444== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26444== Open file descriptor 12: ==26444== at 0xFEE00BD: pipe (pipe.c:29) ==26444== by 0x1A4A007D: ??? ==26444== by 0x134AA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26444== by 0x107D9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26444== by 0x10772D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26444== by 0x10920D38: PetscInitialize (pinit.c:924) ==26444== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26444== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26444== by 0x1387F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26444== by 0x13327D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26444== by 0x1362B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26444== by 0x136152: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26444== by 0x1367E9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26444== by 0x1316A5: main (TestPottsMesh.cpp:19) ==26444== ==26444== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26444== at 0xFEE4A5C: __open_nocancel (open64_nocancel.c:39) ==26444== by 0xFE68B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26444== by 0xFB1B822: ??? ==26444== by 0xFB1B96F: ??? ==26444== by 0x1354F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26444== by 0x1354F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26444== by 0x13505922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26444== by 0x134AA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26444== by 0x107D9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26444== by 0x10772D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26444== by 0x10920D38: PetscInitialize (pinit.c:924) ==26444== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26444== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26444== by 0x1387F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26444== by 0x13327D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26444== by 0x1362B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26444== by 0x136152: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26444== by 0x1367E9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26444== by 0x1316A5: main (TestPottsMesh.cpp:19) ==26444== ==26444== Open file descriptor 145: ==26444== ==26444== ==26444== Open file descriptor 142: ==26444== ==26444== ==26444== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMesh_valgrind.txt ==26444== ==26444== ==26444== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26444== ==26444== ==26444== ==26444== HEAP SUMMARY: ==26444== in use at exit: 35,183 bytes in 289 blocks ==26444== total heap usage: 63,468 allocs, 63,179 frees, 9,325,789 bytes allocated ==26444== ==26444== LEAK SUMMARY: ==26444== definitely lost: 0 bytes in 0 blocks ==26444== indirectly lost: 0 bytes in 0 blocks ==26444== possibly lost: 0 bytes in 0 blocks ==26444== still reachable: 24 bytes in 2 blocks ==26444== suppressed: 35,159 bytes in 287 blocks ==26444== Reachable blocks (those to which a pointer was found) are not shown. ==26444== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26444== ==26444== For lists of detected and suppressed errors, rerun with: -s ==26444== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)