==26835== Memcheck, a memory error detector ==26835== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26835== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26835== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26835== Parent PID: 24649 ==26835== ==26835== ==26835== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26835== Open file descriptor 12: ==26835== at 0xF9870BD: pipe (pipe.c:29) ==26835== by 0x1A4A107D: ??? ==26835== by 0x146384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26835== by 0xF5D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26835== by 0xF56DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26835== by 0xE264D38: PetscInitialize (pinit.c:924) ==26835== by 0xDD8D56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26835== by 0xDD8D5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26835== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26835== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26835== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26835== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26835== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26835== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26835== ==26835== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26835== at 0xF98BA5C: __open_nocancel (open64_nocancel.c:39) ==26835== by 0xF90FB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26835== by 0xDDC4822: ??? ==26835== by 0xDDC496F: ??? ==26835== by 0x146DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26835== by 0x146DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26835== by 0x14693922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26835== by 0x146382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26835== by 0xF5D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26835== by 0xF56DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26835== by 0xE264D38: PetscInitialize (pinit.c:924) ==26835== by 0xDD8D56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26835== by 0xDD8D5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26835== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26835== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26835== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26835== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26835== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26835== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26835== ==26835== Open file descriptor 145: ==26835== ==26835== ==26835== Open file descriptor 142: ==26835== ==26835== ==26835== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26835== ==26835== ==26835== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26835== ==26835== ==26835== ==26835== HEAP SUMMARY: ==26835== in use at exit: 35,215 bytes in 290 blocks ==26835== total heap usage: 51,711 allocs, 51,421 frees, 8,939,392 bytes allocated ==26835== ==26835== LEAK SUMMARY: ==26835== definitely lost: 0 bytes in 0 blocks ==26835== indirectly lost: 0 bytes in 0 blocks ==26835== possibly lost: 0 bytes in 0 blocks ==26835== still reachable: 56 bytes in 3 blocks ==26835== suppressed: 35,159 bytes in 287 blocks ==26835== Reachable blocks (those to which a pointer was found) are not shown. ==26835== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26835== ==26835== For lists of detected and suppressed errors, rerun with: -s ==26835== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)