==40662== Memcheck, a memory error detector ==40662== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40662== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40662== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40662== Parent PID: 24649 ==40662== ==40662== ==40662== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40662== Open file descriptor 12: ==40662== at 0x1169A0BD: pipe (pipe.c:29) ==40662== by 0x1A4A007D: ??? ==40662== by 0x1564E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40662== by 0x112E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40662== by 0x11280D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40662== by 0xFF77D38: PetscInitialize (pinit.c:924) ==40662== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40662== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40662== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40662== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40662== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40662== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40662== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40662== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40662== ==40662== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40662== at 0x1169EA5C: __open_nocancel (open64_nocancel.c:39) ==40662== by 0x11622B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40662== by 0xFB1B822: ??? ==40662== by 0xFB1B96F: ??? ==40662== by 0x156F36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40662== by 0x156F3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40662== by 0x156A9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40662== by 0x1564E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40662== by 0x112E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40662== by 0x11280D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40662== by 0xFF77D38: PetscInitialize (pinit.c:924) ==40662== by 0xFAE456F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40662== by 0xFAE45BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40662== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40662== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40662== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40662== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40662== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40662== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40662== ==40662== Open file descriptor 145: ==40662== ==40662== ==40662== Open file descriptor 142: ==40662== ==40662== ==40662== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==40662== ==40662== ==40662== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40662== ==40662== ==40662== ==40662== HEAP SUMMARY: ==40662== in use at exit: 35,142 bytes in 286 blocks ==40662== total heap usage: 639,766 allocs, 639,480 frees, 181,935,230 bytes allocated ==40662== ==40662== LEAK SUMMARY: ==40662== definitely lost: 0 bytes in 0 blocks ==40662== indirectly lost: 0 bytes in 0 blocks ==40662== possibly lost: 0 bytes in 0 blocks ==40662== still reachable: 56 bytes in 3 blocks ==40662== suppressed: 35,086 bytes in 283 blocks ==40662== Reachable blocks (those to which a pointer was found) are not shown. ==40662== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40662== ==40662== For lists of detected and suppressed errors, rerun with: -s ==40662== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)