==40933== Memcheck, a memory error detector ==40933== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40933== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40933== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==40933== Parent PID: 24649 ==40933== ==40933== ==40933== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40933== Open file descriptor 12: ==40933== at 0x112470BD: pipe (pipe.c:29) ==40933== by 0x1BD6007D: ??? ==40933== by 0x15EAB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40933== by 0x10B4F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40933== by 0x10AE8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40933== by 0x6277D38: PetscInitialize (pinit.c:924) ==40933== by 0x10A3256F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40933== by 0x10A325BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40933== by 0x18F0ED: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40933== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40933== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40933== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40933== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40933== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40933== ==40933== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40933== at 0x1124BA5C: __open_nocancel (open64_nocancel.c:39) ==40933== by 0x111CFB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40933== by 0x611C822: ??? ==40933== by 0x611C96F: ??? ==40933== by 0x15F506DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40933== by 0x15F50938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40933== by 0x15F06922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40933== by 0x15EAB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40933== by 0x10B4F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40933== by 0x10AE8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40933== by 0x6277D38: PetscInitialize (pinit.c:924) ==40933== by 0x10A3256F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40933== by 0x10A325BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40933== by 0x18F0ED: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40933== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40933== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40933== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40933== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40933== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40933== ==40933== Open file descriptor 145: ==40933== ==40933== ==40933== Open file descriptor 142: ==40933== ==40933== ==40933== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==40933== ==40933== ==40933== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40933== ==40933== ==40933== ==40933== HEAP SUMMARY: ==40933== in use at exit: 35,295 bytes in 291 blocks ==40933== total heap usage: 738,891 allocs, 738,600 frees, 41,729,830 bytes allocated ==40933== ==40933== LEAK SUMMARY: ==40933== definitely lost: 0 bytes in 0 blocks ==40933== indirectly lost: 0 bytes in 0 blocks ==40933== possibly lost: 0 bytes in 0 blocks ==40933== still reachable: 120 bytes in 4 blocks ==40933== suppressed: 35,175 bytes in 287 blocks ==40933== Reachable blocks (those to which a pointer was found) are not shown. ==40933== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40933== ==40933== For lists of detected and suppressed errors, rerun with: -s ==40933== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)