==26169== Memcheck, a memory error detector ==26169== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26169== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26169== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==26169== Parent PID: 24649 ==26169== ==26169== ==26169== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26169== Open file descriptor 12: ==26169== at 0xF6400BD: pipe (pipe.c:29) ==26169== by 0x1A4A107D: ??? ==26169== by 0x145EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26169== by 0xF28F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26169== by 0xF228D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26169== by 0xDF1FD38: PetscInitialize (pinit.c:924) ==26169== by 0xDD8D56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26169== by 0xDD8D5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26169== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26169== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26169== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26169== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26169== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26169== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==26169== ==26169== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26169== at 0xF644A5C: __open_nocancel (open64_nocancel.c:39) ==26169== by 0xF5C8B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26169== by 0xDDC4822: ??? ==26169== by 0xDDC496F: ??? ==26169== by 0x146906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26169== by 0x14690938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26169== by 0x14646922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26169== by 0x145EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26169== by 0xF28F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26169== by 0xF228D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26169== by 0xDF1FD38: PetscInitialize (pinit.c:924) ==26169== by 0xDD8D56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26169== by 0xDD8D5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26169== by 0x137E7B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26169== by 0x13098F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26169== by 0x133A5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26169== by 0x1338FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26169== by 0x133F93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26169== by 0x12D2C5: main (TestSimpleCellCycleModels.cpp:19) ==26169== ==26169== Open file descriptor 145: ==26169== ==26169== ==26169== Open file descriptor 142: ==26169== ==26169== ==26169== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==26169== ==26169== ==26169== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26169== ==26169== ==26169== ==26169== HEAP SUMMARY: ==26169== in use at exit: 35,247 bytes in 291 blocks ==26169== total heap usage: 63,206 allocs, 62,915 frees, 11,232,373 bytes allocated ==26169== ==26169== LEAK SUMMARY: ==26169== definitely lost: 0 bytes in 0 blocks ==26169== indirectly lost: 0 bytes in 0 blocks ==26169== possibly lost: 0 bytes in 0 blocks ==26169== still reachable: 88 bytes in 4 blocks ==26169== suppressed: 35,159 bytes in 287 blocks ==26169== Reachable blocks (those to which a pointer was found) are not shown. ==26169== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26169== ==26169== For lists of detected and suppressed errors, rerun with: -s ==26169== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)