==17006== Memcheck, a memory error detector
==17006== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
==17006== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info
==17006== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/continuum_mechanics/test/TestMoreMechanics -malloc_debug -malloc_dump -memory_info
==17006== Parent PID: 16053
==17006== 
==17006== 
==17006== FILE DESCRIPTORS: 11 open (6 inherited) at exit.
==17006== Open file descriptor 10: /dev/shm/open_mpi.0000
==17006==    at 0xAB6F536: __open_nocancel (open64_nocancel.c:39)
==17006==    by 0xAAF3BC3: shm_open@@GLIBC_2.34 (shm_open.c:46)
==17006==    by 0x1052A89E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x1052AA71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x10529C38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x10529F97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x103F9159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0xD1520E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD15749F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD1582C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD14F18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD189627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0x52E4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17006==    by 0xA6522D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17006==    by 0xA652327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17006==    by 0x4031844: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17006==    by 0x402B8B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17006==    by 0x402EE0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17006==    by 0x402EC32: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17006==    by 0x402F3DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17006==    by 0x40285B8: main (TestMoreMechanics.cpp:19)
==17006== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:__open_nocancel
   fun:shm_open@@GLIBC_2.34
   fun:opal_shmem_posix_shm_open
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   fun:opal_shmem_base_select
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17006== Open file descriptor 9:
==17006==    at 0xAB7D96B: eventfd (syscall-template.S:120)
==17006==    by 0x109CA188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109C8395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109C8704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109C89F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x104EF0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x104EF1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x103F9120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0xD1520E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD15749F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD1582C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD14F18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD189627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0x52E4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17006==    by 0xA6522D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17006==    by 0xA652327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17006==    by 0x4031844: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17006==    by 0x402B8B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17006==    by 0x402EE0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17006==    by 0x402EC32: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17006==    by 0x402F3DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17006==    by 0x40285B8: main (TestMoreMechanics.cpp:19)
==17006== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:eventfd
   fun:evutil_eventfd_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:evthread_make_base_notifiable
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17006== Open file descriptor 8:
==17006==    at 0xAB6E2BB: pipe2 (syscall-template.S:120)
==17006==    by 0x109C9F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109CC579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109CC774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109C88AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x104EF0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x104EF1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x103F9120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0xD1520E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD15749F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD1582C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD14F18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD189627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0x52E4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17006==    by 0xA6522D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17006==    by 0xA652327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17006==    by 0x4031844: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17006==    by 0x402B8B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17006==    by 0x402EE0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17006==    by 0x402EC32: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17006==    by 0x402F3DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17006==    by 0x40285B8: main (TestMoreMechanics.cpp:19)
==17006== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17006== Open file descriptor 7:
==17006==    at 0xAB6E2BB: pipe2 (syscall-template.S:120)
==17006==    by 0x109C9F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109CC579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109CC774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109C88AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x104EF0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x104EF1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x103F9120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0xD1520E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD15749F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD1582C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD14F18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD189627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0x52E4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17006==    by 0xA6522D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17006==    by 0xA652327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17006==    by 0x4031844: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17006==    by 0x402B8B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17006==    by 0x402EE0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17006==    by 0x402EC32: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17006==    by 0x402F3DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17006==    by 0x40285B8: main (TestMoreMechanics.cpp:19)
==17006== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17006== Open file descriptor 6:
==17006==    at 0xAB7E46B: epoll_create1 (syscall-template.S:120)
==17006==    by 0x109CC6FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x109C88AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17006==    by 0x104EF0D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x104EF1E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0x103F9120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17006==    by 0xD1520E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD15749F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD1582C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD14F18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0xD189627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17006==    by 0x52E4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17006==    by 0xA6522D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17006==    by 0xA652327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17006==    by 0x4031844: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17006==    by 0x402B8B1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17006==    by 0x402EE0E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17006==    by 0x402EC32: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17006==    by 0x402F3DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17006==    by 0x40285B8: main (TestMoreMechanics.cpp:19)
==17006== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:epoll_create1
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17006== 
==17006== HEAP SUMMARY:
==17006==     in use at exit: 128,555 bytes in 901 blocks
==17006==   total heap usage: 387,119 allocs, 386,218 frees, 117,784,748 bytes allocated
==17006== 
==17006== LEAK SUMMARY:
==17006==    definitely lost: 0 bytes in 0 blocks
==17006==    indirectly lost: 0 bytes in 0 blocks
==17006==      possibly lost: 0 bytes in 0 blocks
==17006==    still reachable: 12,045 bytes in 45 blocks
==17006==         suppressed: 116,510 bytes in 856 blocks
==17006== Reachable blocks (those to which a pointer was found) are not shown.
==17006== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==17006== 
==17006== For lists of detected and suppressed errors, rerun with: -s
==17006== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 36 from 36)