==15668== Memcheck, a memory error detector
==15668== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
==15668== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info
==15668== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCellBasedEventHandler -malloc_debug -malloc_dump -memory_info
==15668== Parent PID: 15648
==15668== 
==15668== 
==15668== FILE DESCRIPTORS: 11 open (6 inherited) at exit.
==15668== Open file descriptor 10: /dev/shm/open_mpi.0000
==15668==    at 0x517C536: __open_nocancel (open64_nocancel.c:39)
==15668==    by 0x5100BC3: shm_open@@GLIBC_2.34 (shm_open.c:46)
==15668==    by 0x71A489E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71A4A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71A3C38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71A3F97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x7073159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x4A150E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A4C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x5B6D446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15668==    by 0x492A2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15668==    by 0x492A327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15668==    by 0x400CAC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==15668==    by 0x4007FC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15668==    by 0x400AB28: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15668==    by 0x400A9C5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15668==    by 0x400B073: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15668==    by 0x40067B2: main (TestCellBasedEventHandler.cpp:18)
==15668== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:__open_nocancel
   fun:shm_open@@GLIBC_2.34
   fun:opal_shmem_posix_shm_open
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   fun:opal_shmem_base_select
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15668== Open file descriptor 9:
==15668==    at 0x518A96B: eventfd (syscall-template.S:120)
==15668==    by 0x7204188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x7202395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x7202704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x72029F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x71690D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71691E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x7073120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x4A150E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A4C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x5B6D446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15668==    by 0x492A2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15668==    by 0x492A327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15668==    by 0x400CAC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==15668==    by 0x4007FC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15668==    by 0x400AB28: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15668==    by 0x400A9C5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15668==    by 0x400B073: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15668==    by 0x40067B2: main (TestCellBasedEventHandler.cpp:18)
==15668== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:eventfd
   fun:evutil_eventfd_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:evthread_make_base_notifiable
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15668== Open file descriptor 8:
==15668==    at 0x517B2BB: pipe2 (syscall-template.S:120)
==15668==    by 0x7203F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x7206579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x7206774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x72028AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x71690D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71691E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x7073120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x4A150E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A4C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x5B6D446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15668==    by 0x492A2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15668==    by 0x492A327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15668==    by 0x400CAC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==15668==    by 0x4007FC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15668==    by 0x400AB28: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15668==    by 0x400A9C5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15668==    by 0x400B073: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15668==    by 0x40067B2: main (TestCellBasedEventHandler.cpp:18)
==15668== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15668== Open file descriptor 7:
==15668==    at 0x517B2BB: pipe2 (syscall-template.S:120)
==15668==    by 0x7203F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x7206579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x7206774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x72028AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x71690D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71691E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x7073120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x4A150E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A4C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x5B6D446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15668==    by 0x492A2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15668==    by 0x492A327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15668==    by 0x400CAC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==15668==    by 0x4007FC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15668==    by 0x400AB28: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15668==    by 0x400A9C5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15668==    by 0x400B073: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15668==    by 0x40067B2: main (TestCellBasedEventHandler.cpp:18)
==15668== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15668== Open file descriptor 4:
==15668==    at 0x518B46B: epoll_create1 (syscall-template.S:120)
==15668==    by 0x72066FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x72028AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15668==    by 0x71690D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x71691E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x7073120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15668==    by 0x4A150E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A1218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x4A4C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15668==    by 0x5B6D446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15668==    by 0x492A2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15668==    by 0x492A327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15668==    by 0x400CAC0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==15668==    by 0x4007FC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15668==    by 0x400AB28: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15668==    by 0x400A9C5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15668==    by 0x400B073: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15668==    by 0x40067B2: main (TestCellBasedEventHandler.cpp:18)
==15668== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:epoll_create1
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15668== 
==15668== HEAP SUMMARY:
==15668==     in use at exit: 103,457 bytes in 641 blocks
==15668==   total heap usage: 24,522 allocs, 23,881 frees, 8,120,242 bytes allocated
==15668== 
==15668== LEAK SUMMARY:
==15668==    definitely lost: 0 bytes in 0 blocks
==15668==    indirectly lost: 0 bytes in 0 blocks
==15668==      possibly lost: 0 bytes in 0 blocks
==15668==    still reachable: 10,073 bytes in 40 blocks
==15668==         suppressed: 93,384 bytes in 601 blocks
==15668== Reachable blocks (those to which a pointer was found) are not shown.
==15668== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==15668== 
==15668== For lists of detected and suppressed errors, rerun with: -s
==15668== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)