==14414== Memcheck, a memory error detector
==14414== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
==14414== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info
==14414== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info
==14414== Parent PID: 13868
==14414== 
==14414== 
==14414== FILE DESCRIPTORS: 11 open (6 inherited) at exit.
==14414== Open file descriptor 10: /dev/shm/open_mpi.0000
==14414==    at 0x87A8536: __open_nocancel (open64_nocancel.c:39)
==14414==    by 0x872CBC3: shm_open@@GLIBC_2.34 (shm_open.c:46)
==14414==    by 0xF3C089E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3C0A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3BFC38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3BFF97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF28F159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0x8AF40E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF949F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AFA2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF118F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8B2B627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x9ADF446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==14414==    by 0x833D2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==14414==    by 0x833D327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==14414==    by 0x4013666: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==14414==    by 0x400E58D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==14414==    by 0x4011174: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==14414==    by 0x4010FA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==14414==    by 0x40116E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==14414==    by 0x400C952: main (TestGeneralizedRushLarsen.cpp:19)
==14414== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:__open_nocancel
   fun:shm_open@@GLIBC_2.34
   fun:opal_shmem_posix_shm_open
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   fun:opal_shmem_base_select
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==14414== Open file descriptor 9:
==14414==    at 0x87B696B: eventfd (syscall-template.S:120)
==14414==    by 0xF422188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF420395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF420704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF4209F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF3850D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3851E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF28F120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0x8AF40E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF949F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AFA2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF118F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8B2B627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x9ADF446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==14414==    by 0x833D2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==14414==    by 0x833D327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==14414==    by 0x4013666: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==14414==    by 0x400E58D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==14414==    by 0x4011174: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==14414==    by 0x4010FA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==14414==    by 0x40116E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==14414==    by 0x400C952: main (TestGeneralizedRushLarsen.cpp:19)
==14414== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:eventfd
   fun:evutil_eventfd_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:evthread_make_base_notifiable
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==14414== Open file descriptor 8:
==14414==    at 0x87A72BB: pipe2 (syscall-template.S:120)
==14414==    by 0xF421F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF424579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF424774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF4208AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF3850D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3851E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF28F120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0x8AF40E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF949F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AFA2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF118F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8B2B627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x9ADF446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==14414==    by 0x833D2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==14414==    by 0x833D327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==14414==    by 0x4013666: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==14414==    by 0x400E58D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==14414==    by 0x4011174: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==14414==    by 0x4010FA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==14414==    by 0x40116E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==14414==    by 0x400C952: main (TestGeneralizedRushLarsen.cpp:19)
==14414== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==14414== Open file descriptor 7:
==14414==    at 0x87A72BB: pipe2 (syscall-template.S:120)
==14414==    by 0xF421F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF424579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF424774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF4208AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF3850D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3851E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF28F120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0x8AF40E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF949F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AFA2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF118F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8B2B627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x9ADF446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==14414==    by 0x833D2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==14414==    by 0x833D327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==14414==    by 0x4013666: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==14414==    by 0x400E58D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==14414==    by 0x4011174: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==14414==    by 0x4010FA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==14414==    by 0x40116E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==14414==    by 0x400C952: main (TestGeneralizedRushLarsen.cpp:19)
==14414== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==14414== Open file descriptor 5:
==14414==    at 0x87B746B: epoll_create1 (syscall-template.S:120)
==14414==    by 0xF4246FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF4208AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==14414==    by 0xF3850D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF3851E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0xF28F120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==14414==    by 0x8AF40E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF949F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AFA2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8AF118F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x8B2B627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==14414==    by 0x9ADF446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==14414==    by 0x833D2D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==14414==    by 0x833D327: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==14414==    by 0x4013666: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==14414==    by 0x400E58D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==14414==    by 0x4011174: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==14414==    by 0x4010FA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==14414==    by 0x40116E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==14414==    by 0x400C952: main (TestGeneralizedRushLarsen.cpp:19)
==14414== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:epoll_create1
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==14414== 
==14414== HEAP SUMMARY:
==14414==     in use at exit: 108,352 bytes in 642 blocks
==14414==   total heap usage: 3,033,631 allocs, 3,032,989 frees, 282,724,992 bytes allocated
==14414== 
==14414== LEAK SUMMARY:
==14414==    definitely lost: 0 bytes in 0 blocks
==14414==    indirectly lost: 0 bytes in 0 blocks
==14414==      possibly lost: 0 bytes in 0 blocks
==14414==    still reachable: 15,754 bytes in 52 blocks
==14414==         suppressed: 92,598 bytes in 590 blocks
==14414== Reachable blocks (those to which a pointer was found) are not shown.
==14414== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==14414== 
==14414== For lists of detected and suppressed errors, rerun with: -s
==14414== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)