==35983== Memcheck, a memory error detector ==35983== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==35983== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==35983== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestStepSizeException -malloc_debug -malloc_dump -memory_info ==35983== Parent PID: 24065 ==35983== ==35983== ==35983== FILE DESCRIPTORS: 9 open (3 std) at exit. ==35983== Open file descriptor 12: ==35983== at 0x4CC50BD: pipe (pipe.c:29) ==35983== by 0xAEB907D: ??? ==35983== by 0x644D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==35983== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==35983== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==35983== by 0x5047D38: PetscInitialize (pinit.c:924) ==35983== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==35983== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==35983== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==35983== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==35983== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==35983== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==35983== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==35983== by 0x10D735: main (TestStepSizeException.cpp:19) ==35983== ==35983== Open file descriptor 8: /dev/shm/open_mpi.0000 ==35983== at 0x4CC9A5C: __open_nocancel (open64_nocancel.c:39) ==35983== by 0x4C4DB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==35983== by 0x4940822: ??? ==35983== by 0x494096F: ??? ==35983== by 0x64F26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==35983== by 0x64F2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==35983== by 0x64A8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==35983== by 0x644D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==35983== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==35983== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==35983== by 0x5047D38: PetscInitialize (pinit.c:924) ==35983== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==35983== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==35983== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==35983== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==35983== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==35983== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==35983== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==35983== by 0x10D735: main (TestStepSizeException.cpp:19) ==35983== ==35983== Open file descriptor 145: ==35983== ==35983== ==35983== Open file descriptor 142: ==35983== ==35983== ==35983== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStepSizeException_valgrind.txt ==35983== ==35983== ==35983== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==35983== ==35983== ==35983== ==35983== HEAP SUMMARY: ==35983== in use at exit: 34,687 bytes in 289 blocks ==35983== total heap usage: 28,727 allocs, 28,438 frees, 7,074,625 bytes allocated ==35983== ==35983== LEAK SUMMARY: ==35983== definitely lost: 0 bytes in 0 blocks ==35983== indirectly lost: 0 bytes in 0 blocks ==35983== possibly lost: 0 bytes in 0 blocks ==35983== still reachable: 24 bytes in 2 blocks ==35983== suppressed: 34,663 bytes in 287 blocks ==35983== Reachable blocks (those to which a pointer was found) are not shown. ==35983== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==35983== ==35983== For lists of detected and suppressed errors, rerun with: -s ==35983== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)