==25805== Memcheck, a memory error detector ==25805== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25805== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25805== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==25805== Parent PID: 23939 ==25805== ==25805== ==25805== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25805== Open file descriptor 12: ==25805== at 0xF8830BD: pipe (pipe.c:29) ==25805== by 0x196F807D: ??? ==25805== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25805== by 0x1017E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0x10117D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0x102C3D38: PetscInitialize (pinit.c:924) ==25805== by 0xF141E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25805== by 0xF141EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25805== by 0x165480: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25805== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25805== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25805== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25805== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25805== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==25805== ==25805== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25805== at 0xF887A5C: __open_nocancel (open64_nocancel.c:39) ==25805== by 0xF80BB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25805== by 0xF179822: ??? ==25805== by 0xF17996F: ??? ==25805== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25805== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25805== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25805== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25805== by 0x1017E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0x10117D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25805== by 0x102C3D38: PetscInitialize (pinit.c:924) ==25805== by 0xF141E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25805== by 0xF141EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25805== by 0x165480: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25805== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25805== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25805== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25805== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25805== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==25805== ==25805== Open file descriptor 145: ==25805== ==25805== ==25805== Open file descriptor 142: ==25805== ==25805== ==25805== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==25805== ==25805== ==25805== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25805== ==25805== ==25805== ==25805== HEAP SUMMARY: ==25805== in use at exit: 17,034 bytes in 73 blocks ==25805== total heap usage: 59,250 allocs, 59,177 frees, 15,208,771 bytes allocated ==25805== ==25805== LEAK SUMMARY: ==25805== definitely lost: 0 bytes in 0 blocks ==25805== indirectly lost: 0 bytes in 0 blocks ==25805== possibly lost: 0 bytes in 0 blocks ==25805== still reachable: 56 bytes in 3 blocks ==25805== suppressed: 16,978 bytes in 70 blocks ==25805== Reachable blocks (those to which a pointer was found) are not shown. ==25805== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25805== ==25805== For lists of detected and suppressed errors, rerun with: -s ==25805== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)