==25345== Memcheck, a memory error detector ==25345== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25345== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25345== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25345== Parent PID: 23939 ==25345== ==25345== ==25345== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25345== Open file descriptor 12: ==25345== at 0xEFCF0BD: pipe (pipe.c:29) ==25345== by 0x196F907D: ??? ==25345== by 0x13C9A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25345== by 0xEC1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xEBB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xD8ACD38: PetscInitialize (pinit.c:924) ==25345== by 0xD71BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25345== by 0xD71BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25345== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25345== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25345== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25345== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25345== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25345== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25345== ==25345== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25345== at 0xEFD3A5C: __open_nocancel (open64_nocancel.c:39) ==25345== by 0xEF57B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25345== by 0xD753822: ??? ==25345== by 0xD75396F: ??? ==25345== by 0x13D3F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25345== by 0x13D3F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25345== by 0x13CF5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25345== by 0x13C9A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25345== by 0xEC1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xEBB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25345== by 0xD8ACD38: PetscInitialize (pinit.c:924) ==25345== by 0xD71BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25345== by 0xD71BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25345== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25345== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25345== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25345== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25345== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25345== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25345== ==25345== Open file descriptor 145: ==25345== ==25345== ==25345== Open file descriptor 142: ==25345== ==25345== ==25345== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25345== ==25345== ==25345== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25345== ==25345== ==25345== ==25345== HEAP SUMMARY: ==25345== in use at exit: 17,034 bytes in 73 blocks ==25345== total heap usage: 530,779 allocs, 530,706 frees, 12,588,623 bytes allocated ==25345== ==25345== LEAK SUMMARY: ==25345== definitely lost: 0 bytes in 0 blocks ==25345== indirectly lost: 0 bytes in 0 blocks ==25345== possibly lost: 0 bytes in 0 blocks ==25345== still reachable: 56 bytes in 3 blocks ==25345== suppressed: 16,978 bytes in 70 blocks ==25345== Reachable blocks (those to which a pointer was found) are not shown. ==25345== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25345== ==25345== For lists of detected and suppressed errors, rerun with: -s ==25345== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)