==39855== Memcheck, a memory error detector ==39855== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39855== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39855== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==39855== Parent PID: 23939 ==39855== ==39855== ==39855== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39855== Open file descriptor 12: ==39855== at 0x110640BD: pipe (pipe.c:29) ==39855== by 0x196F907D: ??? ==39855== by 0x14D054CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39855== by 0x10BCA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39855== by 0x10B63D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39855== by 0xF85AD38: PetscInitialize (pinit.c:924) ==39855== by 0xF384E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39855== by 0xF384EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39855== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39855== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39855== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39855== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39855== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39855== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==39855== ==39855== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39855== at 0x11068A5C: __open_nocancel (open64_nocancel.c:39) ==39855== by 0x10FECB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39855== by 0xF3BC822: ??? ==39855== by 0xF3BC96F: ??? ==39855== by 0x14DAA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39855== by 0x14DAA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39855== by 0x14D60922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39855== by 0x14D052DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39855== by 0x10BCA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39855== by 0x10B63D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39855== by 0xF85AD38: PetscInitialize (pinit.c:924) ==39855== by 0xF384E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39855== by 0xF384EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39855== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39855== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39855== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39855== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39855== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39855== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==39855== ==39855== Open file descriptor 145: ==39855== ==39855== ==39855== Open file descriptor 142: ==39855== ==39855== ==39855== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==39855== ==39855== ==39855== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39855== ==39855== ==39855== ==39855== HEAP SUMMARY: ==39855== in use at exit: 16,961 bytes in 69 blocks ==39855== total heap usage: 3,800,876 allocs, 3,800,807 frees, 177,328,610 bytes allocated ==39855== ==39855== LEAK SUMMARY: ==39855== definitely lost: 0 bytes in 0 blocks ==39855== indirectly lost: 0 bytes in 0 blocks ==39855== possibly lost: 0 bytes in 0 blocks ==39855== still reachable: 56 bytes in 3 blocks ==39855== suppressed: 16,905 bytes in 66 blocks ==39855== Reachable blocks (those to which a pointer was found) are not shown. ==39855== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39855== ==39855== For lists of detected and suppressed errors, rerun with: -s ==39855== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)