==25759== Memcheck, a memory error detector ==25759== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25759== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25759== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchOdeSystem -malloc_debug -malloc_dump -memory_info ==25759== Parent PID: 23939 ==25759== ==25759== ==25759== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25759== Open file descriptor 12: ==25759== at 0xEFCF0BD: pipe (pipe.c:29) ==25759== by 0x196F907D: ??? ==25759== by 0x13C9A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25759== by 0xEC1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25759== by 0xEBB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25759== by 0xD8ACD38: PetscInitialize (pinit.c:924) ==25759== by 0xD71BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25759== by 0xD71BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25759== by 0x123193: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25759== by 0x11E6C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25759== by 0x120CDC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25759== by 0x120BD8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25759== by 0x1211EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25759== by 0x11CEC5: main (TestDeltaNotchOdeSystem.cpp:18) ==25759== ==25759== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25759== at 0xEFD3A5C: __open_nocancel (open64_nocancel.c:39) ==25759== by 0xEF57B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25759== by 0xD753822: ??? ==25759== by 0xD75396F: ??? ==25759== by 0x13D3F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25759== by 0x13D3F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25759== by 0x13CF5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25759== by 0x13C9A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25759== by 0xEC1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25759== by 0xEBB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25759== by 0xD8ACD38: PetscInitialize (pinit.c:924) ==25759== by 0xD71BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25759== by 0xD71BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25759== by 0x123193: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25759== by 0x11E6C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25759== by 0x120CDC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25759== by 0x120BD8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25759== by 0x1211EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25759== by 0x11CEC5: main (TestDeltaNotchOdeSystem.cpp:18) ==25759== ==25759== Open file descriptor 145: ==25759== ==25759== ==25759== Open file descriptor 142: ==25759== ==25759== ==25759== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchOdeSystem_valgrind.txt ==25759== ==25759== ==25759== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25759== ==25759== ==25759== ==25759== HEAP SUMMARY: ==25759== in use at exit: 17,002 bytes in 72 blocks ==25759== total heap usage: 36,795 allocs, 36,723 frees, 6,772,315 bytes allocated ==25759== ==25759== LEAK SUMMARY: ==25759== definitely lost: 0 bytes in 0 blocks ==25759== indirectly lost: 0 bytes in 0 blocks ==25759== possibly lost: 0 bytes in 0 blocks ==25759== still reachable: 24 bytes in 2 blocks ==25759== suppressed: 16,978 bytes in 70 blocks ==25759== Reachable blocks (those to which a pointer was found) are not shown. ==25759== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25759== ==25759== For lists of detected and suppressed errors, rerun with: -s ==25759== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)