==25394== Memcheck, a memory error detector ==25394== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25394== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25394== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25394== Parent PID: 23939 ==25394== ==25394== ==25394== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25394== Open file descriptor 12: ==25394== at 0xEFCF0BD: pipe (pipe.c:29) ==25394== by 0x196F907D: ??? ==25394== by 0x13C9A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25394== by 0xEC1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25394== by 0xEBB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25394== by 0xD8ACD38: PetscInitialize (pinit.c:924) ==25394== by 0xD71BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25394== by 0xD71BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25394== by 0x1360AB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25394== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25394== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25394== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25394== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25394== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25394== ==25394== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25394== at 0xEFD3A5C: __open_nocancel (open64_nocancel.c:39) ==25394== by 0xEF57B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25394== by 0xD753822: ??? ==25394== by 0xD75396F: ??? ==25394== by 0x13D3F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25394== by 0x13D3F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25394== by 0x13CF5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25394== by 0x13C9A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25394== by 0xEC1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25394== by 0xEBB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25394== by 0xD8ACD38: PetscInitialize (pinit.c:924) ==25394== by 0xD71BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25394== by 0xD71BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25394== by 0x1360AB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25394== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25394== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25394== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25394== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25394== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25394== ==25394== Open file descriptor 145: ==25394== ==25394== ==25394== Open file descriptor 142: ==25394== ==25394== ==25394== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25394== ==25394== ==25394== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25394== ==25394== ==25394== ==25394== HEAP SUMMARY: ==25394== in use at exit: 16,977 bytes in 70 blocks ==25394== total heap usage: 4,162,686 allocs, 4,162,616 frees, 437,904,954 bytes allocated ==25394== ==25394== LEAK SUMMARY: ==25394== definitely lost: 0 bytes in 0 blocks ==25394== indirectly lost: 0 bytes in 0 blocks ==25394== possibly lost: 0 bytes in 0 blocks ==25394== still reachable: 72 bytes in 4 blocks ==25394== suppressed: 16,905 bytes in 66 blocks ==25394== Reachable blocks (those to which a pointer was found) are not shown. ==25394== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25394== ==25394== For lists of detected and suppressed errors, rerun with: -s ==25394== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)