==38759== Memcheck, a memory error detector ==38759== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==38759== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==38759== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==38759== Parent PID: 24028 ==38759== ==38759== ==38759== FILE DESCRIPTORS: 9 open (3 std) at exit. ==38759== Open file descriptor 12: ==38759== at 0x10D3A0BD: pipe (pipe.c:29) ==38759== by 0x196F807D: ??? ==38759== by 0x14CB94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38759== by 0x10987418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38759== by 0x10920D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38759== by 0xF617D38: PetscInitialize (pinit.c:924) ==38759== by 0xF141E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38759== by 0xF141EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38759== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==38759== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38759== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38759== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38759== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38759== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==38759== ==38759== Open file descriptor 8: /dev/shm/open_mpi.0000 ==38759== at 0x10D3EA5C: __open_nocancel (open64_nocancel.c:39) ==38759== by 0x10CC2B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==38759== by 0xF179822: ??? ==38759== by 0xF17996F: ??? ==38759== by 0x14D5E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38759== by 0x14D5E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38759== by 0x14D14922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38759== by 0x14CB92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38759== by 0x10987418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38759== by 0x10920D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38759== by 0xF617D38: PetscInitialize (pinit.c:924) ==38759== by 0xF141E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38759== by 0xF141EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38759== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==38759== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38759== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38759== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38759== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38759== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==38759== ==38759== Open file descriptor 145: ==38759== ==38759== ==38759== Open file descriptor 142: ==38759== ==38759== ==38759== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==38759== ==38759== ==38759== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==38759== ==38759== ==38759== ==38759== HEAP SUMMARY: ==38759== in use at exit: 35,199 bytes in 290 blocks ==38759== total heap usage: 563,530 allocs, 563,240 frees, 320,611,224 bytes allocated ==38759== ==38759== LEAK SUMMARY: ==38759== definitely lost: 0 bytes in 0 blocks ==38759== indirectly lost: 0 bytes in 0 blocks ==38759== possibly lost: 0 bytes in 0 blocks ==38759== still reachable: 56 bytes in 3 blocks ==38759== suppressed: 35,143 bytes in 287 blocks ==38759== Reachable blocks (those to which a pointer was found) are not shown. ==38759== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==38759== ==38759== For lists of detected and suppressed errors, rerun with: -s ==38759== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)