==40141== Memcheck, a memory error detector ==40141== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40141== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40141== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==40141== Parent PID: 23991 ==40141== ==40141== ==40141== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40141== Open file descriptor 12: ==40141== at 0x111010BD: pipe (pipe.c:29) ==40141== by 0x1B3BB07D: ??? ==40141== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40141== by 0x11B25418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40141== by 0x11ABED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40141== by 0x11C6AD38: PetscInitialize (pinit.c:924) ==40141== by 0x10A01E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40141== by 0x10A01EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40141== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40141== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40141== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40141== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40141== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40141== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40141== ==40141== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40141== at 0x11105A5C: __open_nocancel (open64_nocancel.c:39) ==40141== by 0x11089B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40141== by 0x10A39822: ??? ==40141== by 0x10A3996F: ??? ==40141== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40141== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40141== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40141== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40141== by 0x11B25418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40141== by 0x11ABED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40141== by 0x11C6AD38: PetscInitialize (pinit.c:924) ==40141== by 0x10A01E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40141== by 0x10A01EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40141== by 0x126AD2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40141== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40141== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40141== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40141== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40141== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40141== ==40141== Open file descriptor 145: ==40141== ==40141== ==40141== Open file descriptor 142: ==40141== ==40141== ==40141== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==40141== ==40141== ==40141== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40141== ==40141== ==40141== ==40141== HEAP SUMMARY: ==40141== in use at exit: 35,215 bytes in 290 blocks ==40141== total heap usage: 40,298 allocs, 40,008 frees, 8,094,504 bytes allocated ==40141== ==40141== LEAK SUMMARY: ==40141== definitely lost: 0 bytes in 0 blocks ==40141== indirectly lost: 0 bytes in 0 blocks ==40141== possibly lost: 0 bytes in 0 blocks ==40141== still reachable: 56 bytes in 3 blocks ==40141== suppressed: 35,159 bytes in 287 blocks ==40141== Reachable blocks (those to which a pointer was found) are not shown. ==40141== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40141== ==40141== For lists of detected and suppressed errors, rerun with: -s ==40141== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)