==15442== Memcheck, a memory error detector ==15442== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al. ==15442== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info ==15442== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestModernCppFeatures -malloc_debug -malloc_dump -memory_info ==15442== Parent PID: 15423 ==15442== ==15442== ==15442== FILE DESCRIPTORS: 11 open (6 inherited) at exit. ==15442== Open file descriptor 10: /dev/shm/open_mpi.0000 ==15442== at 0x6A89536: __open_nocancel (open64_nocancel.c:39) ==15442== by 0x6A0DBC3: shm_open@@GLIBC_2.34 (shm_open.c:46) ==15442== by 0x9B3489E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9B34A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9B33C38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9B33F97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9A03159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x62400E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x624549F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x62462C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x623D18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x6277627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x521E446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15442== by 0x493089B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15442== by 0x49308E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15442== by 0x400D95F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15442== by 0x4008EA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15442== by 0x400B820: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15442== by 0x400B6BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15442== by 0x400BD6B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15442== by 0x4007692: main (TestModernCppFeatures.cpp:18) ==15442== { CoreError:FdNotClosed fun:__open_nocancel fun:shm_open@@GLIBC_2.34 fun:opal_shmem_posix_shm_open obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5 obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5 fun:opal_shmem_base_select fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15442== Open file descriptor 9: ==15442== at 0x6A9796B: eventfd (syscall-template.S:120) ==15442== by 0x9B94188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B92395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B92704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B929F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9AF90D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9AF91E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9A03120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x62400E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x624549F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x62462C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x623D18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x6277627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x521E446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15442== by 0x493089B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15442== by 0x49308E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15442== by 0x400D95F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15442== by 0x4008EA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15442== by 0x400B820: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15442== by 0x400B6BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15442== by 0x400BD6B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15442== by 0x4007692: main (TestModernCppFeatures.cpp:18) ==15442== { CoreError:FdNotClosed fun:eventfd fun:evutil_eventfd_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:evthread_make_base_notifiable fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15442== Open file descriptor 8: ==15442== at 0x6A882BB: pipe2 (syscall-template.S:120) ==15442== by 0x9B93F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B96579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B96774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B928AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9AF90D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9AF91E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9A03120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x62400E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x624549F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x62462C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x623D18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x6277627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x521E446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15442== by 0x493089B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15442== by 0x49308E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15442== by 0x400D95F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15442== by 0x4008EA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15442== by 0x400B820: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15442== by 0x400B6BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15442== by 0x400BD6B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15442== by 0x4007692: main (TestModernCppFeatures.cpp:18) ==15442== { CoreError:FdNotClosed fun:pipe2 fun:evutil_make_internal_pipe_ fun:evsig_init_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15442== Open file descriptor 7: ==15442== at 0x6A882BB: pipe2 (syscall-template.S:120) ==15442== by 0x9B93F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B96579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B96774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B928AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9AF90D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9AF91E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9A03120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x62400E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x624549F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x62462C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x623D18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x6277627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x521E446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15442== by 0x493089B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15442== by 0x49308E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15442== by 0x400D95F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15442== by 0x4008EA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15442== by 0x400B820: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15442== by 0x400B6BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15442== by 0x400BD6B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15442== by 0x4007692: main (TestModernCppFeatures.cpp:18) ==15442== { CoreError:FdNotClosed fun:pipe2 fun:evutil_make_internal_pipe_ fun:evsig_init_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15442== Open file descriptor 5: ==15442== at 0x6A9846B: epoll_create1 (syscall-template.S:120) ==15442== by 0x9B966FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9B928AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15442== by 0x9AF90D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9AF91E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x9A03120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15442== by 0x62400E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x624549F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x62462C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x623D18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x6277627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15442== by 0x521E446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15442== by 0x493089B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15442== by 0x49308E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15442== by 0x400D95F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15442== by 0x4008EA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15442== by 0x400B820: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15442== by 0x400B6BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15442== by 0x400BD6B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15442== by 0x4007692: main (TestModernCppFeatures.cpp:18) ==15442== { CoreError:FdNotClosed fun:epoll_create1 obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15442== ==15442== HEAP SUMMARY: ==15442== in use at exit: 127,023 bytes in 929 blocks ==15442== total heap usage: 25,020 allocs, 24,091 frees, 10,139,949 bytes allocated ==15442== ==15442== LEAK SUMMARY: ==15442== definitely lost: 0 bytes in 0 blocks ==15442== indirectly lost: 0 bytes in 0 blocks ==15442== possibly lost: 0 bytes in 0 blocks ==15442== still reachable: 10,073 bytes in 40 blocks ==15442== suppressed: 116,950 bytes in 889 blocks ==15442== Reachable blocks (those to which a pointer was found) are not shown. ==15442== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==15442== ==15442== For lists of detected and suppressed errors, rerun with: -s ==15442== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)