==15799== Memcheck, a memory error detector ==15799== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al. ==15799== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info ==15799== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestRandomNumberGenerator -malloc_debug -malloc_dump -memory_info ==15799== Parent PID: 15664 ==15799== ==15799== ==15799== FILE DESCRIPTORS: 11 open (6 inherited) at exit. ==15799== Open file descriptor 10: /dev/shm/open_mpi.0000 ==15799== at 0x6A0A536: __open_nocancel (open64_nocancel.c:39) ==15799== by 0x698EBC3: shm_open@@GLIBC_2.34 (shm_open.c:46) ==15799== by 0x9B5289E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B52A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B51C38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B51F97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9A21159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x62A50E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AA49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AB2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62A218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62DC627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x52A4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15799== by 0x494E89B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15799== by 0x494E8E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15799== by 0x401AA01: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15799== by 0x40157E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15799== by 0x4018122: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15799== by 0x4017FC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15799== by 0x401866D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15799== by 0x4013FC2: main (TestRandomNumberGenerator.cpp:18) ==15799== { CoreError:FdNotClosed fun:__open_nocancel fun:shm_open@@GLIBC_2.34 fun:opal_shmem_posix_shm_open obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5 obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5 fun:opal_shmem_base_select fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15799== Open file descriptor 9: ==15799== at 0x6A1896B: eventfd (syscall-template.S:120) ==15799== by 0x9BB2188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB0395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB0704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB09F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9B170D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B171E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9A21120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x62A50E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AA49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AB2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62A218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62DC627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x52A4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15799== by 0x494E89B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15799== by 0x494E8E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15799== by 0x401AA01: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15799== by 0x40157E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15799== by 0x4018122: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15799== by 0x4017FC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15799== by 0x401866D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15799== by 0x4013FC2: main (TestRandomNumberGenerator.cpp:18) ==15799== { CoreError:FdNotClosed fun:eventfd fun:evutil_eventfd_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:evthread_make_base_notifiable fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15799== Open file descriptor 8: ==15799== at 0x6A092BB: pipe2 (syscall-template.S:120) ==15799== by 0x9BB1F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB4579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB4774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB08AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9B170D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B171E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9A21120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x62A50E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AA49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AB2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62A218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62DC627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x52A4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15799== by 0x494E89B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15799== by 0x494E8E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15799== by 0x401AA01: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15799== by 0x40157E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15799== by 0x4018122: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15799== by 0x4017FC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15799== by 0x401866D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15799== by 0x4013FC2: main (TestRandomNumberGenerator.cpp:18) ==15799== { CoreError:FdNotClosed fun:pipe2 fun:evutil_make_internal_pipe_ fun:evsig_init_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15799== Open file descriptor 7: ==15799== at 0x6A092BB: pipe2 (syscall-template.S:120) ==15799== by 0x9BB1F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB4579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB4774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB08AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9B170D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B171E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9A21120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x62A50E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AA49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AB2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62A218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62DC627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x52A4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15799== by 0x494E89B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15799== by 0x494E8E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15799== by 0x401AA01: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15799== by 0x40157E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15799== by 0x4018122: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15799== by 0x4017FC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15799== by 0x401866D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15799== by 0x4013FC2: main (TestRandomNumberGenerator.cpp:18) ==15799== { CoreError:FdNotClosed fun:pipe2 fun:evutil_make_internal_pipe_ fun:evsig_init_ obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15799== Open file descriptor 6: ==15799== at 0x6A1946B: epoll_create1 (syscall-template.S:120) ==15799== by 0x9BB46FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9BB08AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1) ==15799== by 0x9B170D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9B171E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x9A21120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5) ==15799== by 0x62A50E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AA49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62AB2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62A218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x62DC627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7) ==15799== by 0x52A4446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4) ==15799== by 0x494E89B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==15799== by 0x494E8E9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==15799== by 0x401AA01: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==15799== by 0x40157E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==15799== by 0x4018122: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==15799== by 0x4017FC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==15799== by 0x401866D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==15799== by 0x4013FC2: main (TestRandomNumberGenerator.cpp:18) ==15799== { CoreError:FdNotClosed fun:epoll_create1 obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1 fun:event_base_new_with_config fun:opal_event_base_create fun:opal_event_init fun:opal_init fun:ompi_rte_init obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7 fun:ompi_mpi_instance_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN10PetscSetup10setUpWorldEv fun:_ZN7CxxTest20RealWorldDescription5setUpEv fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==15799== ==15799== HEAP SUMMARY: ==15799== in use at exit: 127,105 bytes in 898 blocks ==15799== total heap usage: 25,236 allocs, 24,338 frees, 10,187,522 bytes allocated ==15799== ==15799== LEAK SUMMARY: ==15799== definitely lost: 0 bytes in 0 blocks ==15799== indirectly lost: 0 bytes in 0 blocks ==15799== possibly lost: 0 bytes in 0 blocks ==15799== still reachable: 12,625 bytes in 41 blocks ==15799== suppressed: 114,480 bytes in 857 blocks ==15799== Reachable blocks (those to which a pointer was found) are not shown. ==15799== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==15799== ==15799== For lists of detected and suppressed errors, rerun with: -s ==15799== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)