==17452== Memcheck, a memory error detector
==17452== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
==17452== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info
==17452== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestDistributedBoxCollection -malloc_debug -malloc_dump -memory_info
==17452== Parent PID: 17059
==17452== 
==17452== 
==17452== FILE DESCRIPTORS: 11 open (6 inherited) at exit.
==17452== Open file descriptor 10: /dev/shm/open_mpi.0000
==17452==    at 0xA8F53B6: __open_nocancel (open64_nocancel.c:39)
==17452==    by 0xA879943: shm_open@@GLIBC_2.34 (shm_open.c:46)
==17452==    by 0xF7F089E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7F0A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7EFC38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7EFF97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF6BF159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0x7E1A0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1F49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E202C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1718F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E51627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x6E1B446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17452==    by 0x64E727F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17452==    by 0x64E72CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17452==    by 0x4076EB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17452==    by 0x4070651: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17452==    by 0x407403E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17452==    by 0x4073E62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17452==    by 0x407460B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17452==    by 0x406E678: main (TestDistributedBoxCollection.cpp:19)
==17452== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:__open_nocancel
   fun:shm_open@@GLIBC_2.34
   fun:opal_shmem_posix_shm_open
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   fun:opal_shmem_base_select
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17452== Open file descriptor 9:
==17452==    at 0xA90384B: eventfd (syscall-template.S:120)
==17452==    by 0xF850188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF84E395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF84E704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF84E9F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF7B50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7B51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF6BF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0x7E1A0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1F49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E202C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1718F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E51627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x6E1B446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17452==    by 0x64E727F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17452==    by 0x64E72CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17452==    by 0x4076EB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17452==    by 0x4070651: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17452==    by 0x407403E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17452==    by 0x4073E62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17452==    by 0x407460B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17452==    by 0x406E678: main (TestDistributedBoxCollection.cpp:19)
==17452== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:eventfd
   fun:evutil_eventfd_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:evthread_make_base_notifiable
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17452== Open file descriptor 8:
==17452==    at 0xA8F413B: pipe2 (syscall-template.S:120)
==17452==    by 0xF84FF87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF852579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF852774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF84E8AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF7B50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7B51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF6BF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0x7E1A0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1F49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E202C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1718F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E51627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x6E1B446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17452==    by 0x64E727F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17452==    by 0x64E72CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17452==    by 0x4076EB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17452==    by 0x4070651: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17452==    by 0x407403E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17452==    by 0x4073E62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17452==    by 0x407460B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17452==    by 0x406E678: main (TestDistributedBoxCollection.cpp:19)
==17452== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17452== Open file descriptor 7:
==17452==    at 0xA8F413B: pipe2 (syscall-template.S:120)
==17452==    by 0xF84FF87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF852579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF852774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF84E8AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF7B50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7B51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF6BF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0x7E1A0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1F49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E202C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1718F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E51627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x6E1B446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17452==    by 0x64E727F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17452==    by 0x64E72CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17452==    by 0x4076EB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17452==    by 0x4070651: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17452==    by 0x407403E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17452==    by 0x4073E62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17452==    by 0x407460B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17452==    by 0x406E678: main (TestDistributedBoxCollection.cpp:19)
==17452== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17452== Open file descriptor 4:
==17452==    at 0xA90434B: epoll_create1 (syscall-template.S:120)
==17452==    by 0xF8526FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF84E8AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==17452==    by 0xF7B50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF7B51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0xF6BF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==17452==    by 0x7E1A0E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1F49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E202C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E1718F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x7E51627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==17452==    by 0x6E1B446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==17452==    by 0x64E727F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==17452==    by 0x64E72CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==17452==    by 0x4076EB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==17452==    by 0x4070651: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==17452==    by 0x407403E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==17452==    by 0x4073E62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==17452==    by 0x407460B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==17452==    by 0x406E678: main (TestDistributedBoxCollection.cpp:19)
==17452== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:epoll_create1
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==17452== 
==17452== HEAP SUMMARY:
==17452==     in use at exit: 126,375 bytes in 901 blocks
==17452==   total heap usage: 160,370 allocs, 159,469 frees, 112,821,113 bytes allocated
==17452== 
==17452== LEAK SUMMARY:
==17452==    definitely lost: 0 bytes in 0 blocks
==17452==    indirectly lost: 0 bytes in 0 blocks
==17452==      possibly lost: 0 bytes in 0 blocks
==17452==    still reachable: 11,893 bytes in 44 blocks
==17452==         suppressed: 114,482 bytes in 857 blocks
==17452== Reachable blocks (those to which a pointer was found) are not shown.
==17452== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==17452== 
==17452== For lists of detected and suppressed errors, rerun with: -s
==17452== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)