==15795== Memcheck, a memory error detector
==15795== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
==15795== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info
==15795== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestIonicModels -malloc_debug -malloc_dump -memory_info
==15795== Parent PID: 14726
==15795== 
==15795== 
==15795== FILE DESCRIPTORS: 11 open (6 inherited) at exit.
==15795== Open file descriptor 10: /dev/shm/open_mpi.0000
==15795==    at 0xA3283B6: __open_nocancel (open64_nocancel.c:39)
==15795==    by 0xA2AC943: shm_open@@GLIBC_2.34 (shm_open.c:46)
==15795==    by 0x11AE389E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AE3A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AE2C38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AE2F97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x119B2159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x9BC10E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC649F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC72C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BBE18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BF8627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x8849446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15795==    by 0x9B1871B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15795==    by 0x9B18769: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15795==    by 0x403ED43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==15795==    by 0x4038D8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15795==    by 0x403BF26: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15795==    by 0x403BD54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15795==    by 0x403C499: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15795==    by 0x4033DA2: main (TestIonicModels.cpp:19)
==15795== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:__open_nocancel
   fun:shm_open@@GLIBC_2.34
   fun:opal_shmem_posix_shm_open
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
   fun:opal_shmem_base_select
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15795== Open file descriptor 9:
==15795==    at 0xA33684B: eventfd (syscall-template.S:120)
==15795==    by 0x11B43188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B41395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B41704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B419F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11AA80D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AA81E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x119B2120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x9BC10E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC649F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC72C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BBE18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BF8627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x8849446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15795==    by 0x9B1871B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15795==    by 0x9B18769: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15795==    by 0x403ED43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==15795==    by 0x4038D8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15795==    by 0x403BF26: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15795==    by 0x403BD54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15795==    by 0x403C499: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15795==    by 0x4033DA2: main (TestIonicModels.cpp:19)
==15795== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:eventfd
   fun:evutil_eventfd_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:evthread_make_base_notifiable
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15795== Open file descriptor 8:
==15795==    at 0xA32713B: pipe2 (syscall-template.S:120)
==15795==    by 0x11B42F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B45579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B45774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B418AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11AA80D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AA81E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x119B2120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x9BC10E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC649F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC72C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BBE18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BF8627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x8849446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15795==    by 0x9B1871B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15795==    by 0x9B18769: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15795==    by 0x403ED43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==15795==    by 0x4038D8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15795==    by 0x403BF26: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15795==    by 0x403BD54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15795==    by 0x403C499: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15795==    by 0x4033DA2: main (TestIonicModels.cpp:19)
==15795== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15795== Open file descriptor 7:
==15795==    at 0xA32713B: pipe2 (syscall-template.S:120)
==15795==    by 0x11B42F87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B45579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B45774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B418AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11AA80D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AA81E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x119B2120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x9BC10E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC649F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC72C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BBE18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BF8627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x8849446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15795==    by 0x9B1871B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15795==    by 0x9B18769: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15795==    by 0x403ED43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==15795==    by 0x4038D8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15795==    by 0x403BF26: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15795==    by 0x403BD54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15795==    by 0x403C499: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15795==    by 0x4033DA2: main (TestIonicModels.cpp:19)
==15795== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:pipe2
   fun:evutil_make_internal_pipe_
   fun:evsig_init_
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15795== Open file descriptor 6:
==15795==    at 0xA33734B: epoll_create1 (syscall-template.S:120)
==15795==    by 0x11B456FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11B418AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
==15795==    by 0x11AA80D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x11AA81E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x119B2120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
==15795==    by 0x9BC10E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC649F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BC72C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BBE18F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x9BF8627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
==15795==    by 0x8849446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
==15795==    by 0x9B1871B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==15795==    by 0x9B18769: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==15795==    by 0x403ED43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==15795==    by 0x4038D8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==15795==    by 0x403BF26: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==15795==    by 0x403BD54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==15795==    by 0x403C499: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==15795==    by 0x4033DA2: main (TestIonicModels.cpp:19)
==15795== 
{
   <insert_a_suppression_name_here>
   CoreError:FdNotClosed
   fun:epoll_create1
   obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
   fun:event_base_new_with_config
   fun:opal_event_base_create
   fun:opal_event_init
   fun:opal_init
   fun:ompi_rte_init
   obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
   fun:ompi_mpi_instance_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==15795== 
==15795== HEAP SUMMARY:
==15795==     in use at exit: 105,602 bytes in 629 blocks
==15795==   total heap usage: 1,872,263 allocs, 1,871,634 frees, 1,739,967,685 bytes allocated
==15795== 
==15795== LEAK SUMMARY:
==15795==    definitely lost: 0 bytes in 0 blocks
==15795==    indirectly lost: 0 bytes in 0 blocks
==15795==      possibly lost: 0 bytes in 0 blocks
==15795==    still reachable: 13,825 bytes in 48 blocks
==15795==         suppressed: 91,777 bytes in 581 blocks
==15795== Reachable blocks (those to which a pointer was found) are not shown.
==15795== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==15795== 
==15795== For lists of detected and suppressed errors, rerun with: -s
==15795== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)