File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 112205ms, 91.69% of 122379ms total Dropped 1122 nodes (cum <= 611.89ms) flat flat% sum% cum cum% 0 0% 0% 122367ms 100% __libc_start_call_main 0 0% 0% 122367ms 100% __libc_start_main_impl 0 0% 0% 122367ms 100% _start 0 0% 0% 122364ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 122364ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 122364ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 122364ms 100% main 0 0% 0% 122326ms 100% AbstractConvergenceTester::Converge 0 0% 0% 122326ms 100% CxxTest::RealTestDescription::run 0 0% 0% 122326ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 122326ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 122326ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 122326ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 5ms 0.0041% 0.0041% 121045ms 98.91% AbstractCardiacProblem::Solve 15ms 0.012% 0.016% 120178ms 98.20% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0041% 0.02% 68177ms 55.71% LinearSystem::Solve 4ms 0.0033% 0.024% 67614ms 55.25% KSPSolve 14ms 0.011% 0.035% 67613ms 55.25% KSPSolve_Private 10ms 0.0082% 0.043% 67158ms 54.88% KSPSolve_SYMMLQ 215ms 0.18% 0.22% 42821ms 34.99% AbstractCardiacTissue::SolveCellSystems 2ms 0.0016% 0.22% 37220ms 30.41% PCApply 2ms 0.0016% 0.22% 37214ms 30.41% PCApply_BJacobi_Singleblock 1ms 0.00082% 0.22% 34341ms 28.06% KSPSolve_PREONLY (partial-inline) 5ms 0.0041% 0.23% 33160ms 27.10% PCApply_ICC 9ms 0.0074% 0.23% 33155ms 27.09% MatSolve 32668ms 26.69% 26.93% 33146ms 27.08% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1582ms 1.29% 28.22% 32943ms 26.92% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0033% 28.22% 32268ms 26.37% KSP_PCApply.lto_priv.18 6910ms 5.65% 33.87% 28246ms 23.08% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 19ms 0.016% 33.89% 23333ms 19.07% MatMult 284ms 0.23% 34.12% 23314ms 19.05% MatMult_SeqAIJ (partial-inline) 22828ms 18.65% 52.77% 23311ms 19.05% MatMult_SeqAIJ_Inode (inline) 1893ms 1.55% 54.32% 14713ms 12.02% CardiacNewtonSolver::Solve 298ms 0.24% 54.56% 9008ms 7.36% AbstractCardiacTissue::UpdateCaches (inline) 4585ms 3.75% 58.31% 8770ms 7.17% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2013ms 1.64% 59.95% 8484ms 6.93% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1049ms 0.86% 60.81% 8081ms 6.60% BidomainSolver::SetupLinearSystem 1161ms 0.95% 61.76% 7238ms 5.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00082% 61.76% 7069ms 5.78% KSP_PCApply (partial-inline) 9ms 0.0074% 61.77% 6444ms 5.27% KSPConvergedDefault 5826ms 4.76% 66.53% 5826ms 4.76% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3948ms 3.23% 69.75% 3998ms 3.27% __ieee754_log_fma 0 0% 69.75% 3638ms 2.97% boost::numeric::ublas::norm_inf (inline) 2443ms 2.00% 71.75% 3638ms 2.97% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.75% 3638ms 2.97% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.75% 3638ms 2.97% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 2ms 0.0016% 71.75% 3545ms 2.90% MatNullSpaceRemove 3406ms 2.78% 74.54% 3406ms 2.78% __memcpy_avx_unaligned_erms 0 0% 74.54% 3368ms 2.75% PetscMemcpy (inline) 2973ms 2.43% 76.97% 2973ms 2.43% ddot_ 1780ms 1.45% 78.42% 2961ms 2.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 42ms 0.034% 78.45% 2959ms 2.42% std::pow (inline) 21ms 0.017% 78.47% 2926ms 2.39% VecCopy 388ms 0.32% 78.79% 2910ms 2.38% __pow 3ms 0.0025% 78.79% 2903ms 2.37% VecCopy_Seq (partial-inline) 18ms 0.015% 78.81% 2858ms 2.34% VecAXPY 6ms 0.0049% 78.81% 2840ms 2.32% VecAXPY_Seq 2822ms 2.31% 81.12% 2822ms 2.31% daxpy_ 316ms 0.26% 81.37% 2500ms 2.04% __ieee754_pow_fma 5ms 0.0041% 81.38% 2410ms 1.97% VecDot 0 0% 81.38% 2405ms 1.97% VecDot_Seq 3ms 0.0025% 81.38% 2405ms 1.97% VecXDot_Seq_Private.constprop.0 3ms 0.0025% 81.38% 2119ms 1.73% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0025% 81.39% 2044ms 1.67% VecMDot 11ms 0.009% 81.39% 2041ms 1.67% VecMXDot_Private 2023ms 1.65% 83.05% 2027ms 1.66% VecMDot_Seq 25ms 0.02% 83.07% 1762ms 1.44% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1529ms 1.25% 84.32% 1529ms 1.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1471ms 1.20% 85.52% 1527ms 1.25% exp_inline (inline) 13ms 0.011% 85.53% 1499ms 1.22% VecMAXPY 1476ms 1.21% 86.74% 1486ms 1.21% VecMAXPY_Seq 0 0% 86.74% 1447ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1354ms 1.11% 87.84% 1354ms 1.11% __memset_avx2_unaligned_erms 0 0% 87.84% 1342ms 1.10% PetscMemzero (inline) 4ms 0.0033% 87.85% 1136ms 0.93% VecDuplicate 8ms 0.0065% 87.85% 1134ms 0.93% boost::numeric::ublas::matrix_assign (inline) 203ms 0.17% 88.02% 1120ms 0.92% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.02% 1115ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.02% 1115ms 0.91% CuboidMeshConstructor::Construct 2ms 0.0016% 88.02% 1115ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 0 0% 88.02% 1107ms 0.9% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.02% 1107ms 0.9% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.02% 1107ms 0.9% boost_numeric_ublas_abs (inline) 1107ms 0.9% 88.92% 1107ms 0.9% std::abs (inline) 772ms 0.63% 89.56% 1031ms 0.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00082% 89.56% 1005ms 0.82% Element::Element 4ms 0.0033% 89.56% 966ms 0.79% AbstractTetrahedralElement::CalculateJacobian 5ms 0.0041% 89.56% 942ms 0.77% PetscMallocA 6ms 0.0049% 89.57% 937ms 0.77% PetscMallocAlign (partial-inline) 0 0% 89.57% 925ms 0.76% AbstractTetrahedralElement::AbstractTetrahedralElement 10ms 0.0082% 89.58% 906ms 0.74% VecScale 1ms 0.00082% 89.58% 896ms 0.73% VecScale_Seq 893ms 0.73% 90.31% 893ms 0.73% dscal_ 6ms 0.0049% 90.31% 886ms 0.72% BidomainAssembler::ComputeMatrixTerm 11ms 0.009% 90.32% 876ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 846ms 0.69% 91.01% 846ms 0.69% [libchaste_heart.so] 3ms 0.0025% 91.01% 835ms 0.68% VecNorm 1ms 0.00082% 91.02% 826ms 0.67% VecNorm_Seq 2ms 0.0016% 91.02% 803ms 0.66% BidomainProblem::WriteOneStep 198ms 0.16% 91.18% 738ms 0.6% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.18% 738ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 2ms 0.0016% 91.18% 710ms 0.58% VecDuplicate_Seq 0 0% 91.18% 672ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 5ms 0.0041% 91.18% 616ms 0.5% VecSetType 614ms 0.5% 91.69% 614ms 0.5% log_inline (inline)