File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12726ms, 86.27% of 14751ms total Dropped 717 nodes (cum <= 73.75ms) flat flat% sum% cum cum% 0 0% 0% 14743ms 99.95% __libc_start_call_main 0 0% 0% 14743ms 99.95% __libc_start_main_impl 0 0% 0% 14743ms 99.95% _start 0 0% 0% 14740ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14740ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14740ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14740ms 99.93% main 0 0% 0% 14701ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14701ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14701ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14679ms 99.51% AbstractCardiacProblem::Solve 1ms 0.0068% 0.0068% 11292ms 76.55% AbstractDynamicLinearPdeSolver::Solve 39ms 0.26% 0.27% 8990ms 60.95% AbstractCardiacTissue::SolveCellSystems 134ms 0.91% 1.18% 5574ms 37.79% AbstractCardiacCell::ComputeExceptVoltage 88ms 0.6% 1.78% 4811ms 32.61% AbstractOneStepIvpOdeSolver::InternalSolve 149ms 1.01% 2.79% 4142ms 28.08% EulerIvpOdeSolver::CalculateNextYValue 959ms 6.50% 9.29% 3946ms 26.75% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1704ms 11.55% 20.84% 3535ms 23.96% __GI___exp 1ms 0.0068% 20.85% 3308ms 22.43% MonodomainProblem::WriteOneStep 4ms 0.027% 20.87% 3160ms 21.42% Hdf5DataWriter::PutVector 0 0% 20.87% 3148ms 21.34% H5Dwrite 3ms 0.02% 20.89% 3118ms 21.14% H5D__write 110ms 0.75% 21.64% 2613ms 17.71% AbstractCardiacTissue::UpdateCaches (inline) 810ms 5.49% 27.13% 2472ms 16.76% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.13% 1843ms 12.49% H5D__chunk_collective_write 17ms 0.12% 27.25% 1843ms 12.49% H5F_set_coll_metadata_reads 1623ms 11.00% 38.25% 1772ms 12.01% __ieee754_exp_fma 15ms 0.1% 38.35% 1621ms 10.99% H5FD_s3comms_uriencode 1ms 0.0068% 38.36% 1576ms 10.68% LinearSystem::Solve 1ms 0.0068% 38.36% 1437ms 9.74% KSPSolve 2ms 0.014% 38.38% 1437ms 9.74% KSPSolve_Private 0 0% 38.38% 1422ms 9.64% KSPSolve_CG 57ms 0.39% 38.76% 1281ms 8.68% 2ms 0.014% 38.78% 1276ms 8.65% H5F_block_write 0 0% 38.78% 1274ms 8.64% H5PB_write 2ms 0.014% 38.79% 1273ms 8.63% H5F__accum_write 4ms 0.027% 38.82% 1271ms 8.62% H5FD_write 2ms 0.014% 38.83% 1175ms 7.97% H5D__mpio_select_write 14ms 0.095% 38.93% 1156ms 7.84% H5D__chunk_cacheable 0 0% 38.93% 1071ms 7.26% PMPI_File_write_at_all 1043ms 7.07% 46.00% 1046ms 7.09% __GI_pwritev64 415ms 2.81% 48.81% 995ms 6.75% H5S_select_iterate 9ms 0.061% 48.87% 855ms 5.80% std::pow (inline) 74ms 0.5% 49.37% 846ms 5.74% __pow 1ms 0.0068% 49.38% 818ms 5.55% PCApply 0 0% 49.38% 816ms 5.53% PCApply_BJacobi_Singleblock 1ms 0.0068% 49.39% 774ms 5.25% KSPSolve_PREONLY 107ms 0.73% 50.11% 769ms 5.21% __ieee754_pow_fma 4ms 0.027% 50.14% 766ms 5.19% MatSolve 0 0% 50.14% 766ms 5.19% PCApply_ICC 753ms 5.10% 55.24% 762ms 5.17% MatSolve_SeqSBAIJ_1_NaturalOrdering 341ms 2.31% 57.56% 707ms 4.79% MonodomainSolver::SetupLinearSystem 306ms 2.07% 59.63% 627ms 4.25% CellLuoRudy1991FromCellML::VerifyStateVariables 69ms 0.47% 60.10% 599ms 4.06% H5D__chunk_set_sizes 2ms 0.014% 60.11% 583ms 3.95% KSP_PCApply.lto_priv.7 4ms 0.027% 60.14% 524ms 3.55% MatMult 519ms 3.52% 63.66% 520ms 3.53% MatMult_SeqAIJ 57ms 0.39% 64.04% 441ms 2.99% H5S_mpio_space_type 375ms 2.54% 66.59% 375ms 2.54% log_inline (inline) 3ms 0.02% 66.61% 315ms 2.14% KSPConvergedDefault 201ms 1.36% 67.97% 296ms 2.01% TimeStepper::TimeStepper 262ms 1.78% 69.74% 264ms 1.79% exp_inline (inline) 0 0% 69.74% 237ms 1.61% KSP_PCApply 161ms 1.09% 70.84% 201ms 1.36% AbstractOneStepIvpOdeSolver::Solve 45ms 0.31% 71.14% 195ms 1.32% __GI___libc_malloc 188ms 1.27% 72.42% 188ms 1.27% [libchaste_heart.so] 14ms 0.095% 72.51% 187ms 1.27% H5VM_chunk_index 33ms 0.22% 72.73% 181ms 1.23% __GI___libc_free 150ms 1.02% 73.75% 178ms 1.21% _int_malloc 5ms 0.034% 73.78% 176ms 1.19% ompi_datatype_destroy 6ms 0.041% 73.83% 171ms 1.16% MPI_Type_free 152ms 1.03% 74.86% 169ms 1.15% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 99ms 0.67% 75.53% 169ms 1.15% top12 (inline) 88ms 0.6% 76.12% 151ms 1.02% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 11ms 0.075% 76.20% 150ms 1.02% ompi_datatype_create 8ms 0.054% 76.25% 150ms 1.02% ompi_info_register_framework_params 39ms 0.26% 76.52% 149ms 1.01% ompi_datatype_release_args 66ms 0.45% 76.96% 148ms 1.00% _int_free 2ms 0.014% 76.98% 146ms 0.99% Hdf5DataWriter::PutUnlimitedVariable 146ms 0.99% 77.97% 146ms 0.99% ddot_ 133ms 0.9% 78.87% 133ms 0.9% std::isinf (inline) 14ms 0.095% 78.96% 128ms 0.87% H5S_set_version 25ms 0.17% 79.13% 125ms 0.85% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.0068% 79.14% 124ms 0.84% VecDuplicate 5ms 0.034% 79.17% 123ms 0.83% VecDuplicate_MPI 3ms 0.02% 79.19% 120ms 0.81% PMPI_File_set_view 118ms 0.8% 79.99% 118ms 0.8% TimeStepper::CalculateNextTime 116ms 0.79% 80.78% 116ms 0.79% __ieee754_log_fma 44ms 0.3% 81.08% 114ms 0.77% H5VM_array_calc 106ms 0.72% 81.80% 106ms 0.72% __memcpy_avx_unaligned_erms 2ms 0.014% 81.81% 105ms 0.71% VecNorm 42ms 0.28% 82.10% 101ms 0.68% H5S_hyper_add_span_element 39ms 0.26% 82.36% 101ms 0.68% std::__cxx11::basic_string::basic_string 100ms 0.68% 83.04% 100ms 0.68% H5VM_chunk_index_scaled 1ms 0.0068% 83.05% 99ms 0.67% PMPI_Type_create_resized 2ms 0.014% 83.06% 96ms 0.65% VecNorm_Seq 3ms 0.02% 83.08% 93ms 0.63% ompi_datatype_duplicate 89ms 0.6% 83.68% 89ms 0.6% std::vector::operator[] (inline) 74ms 0.5% 84.18% 87ms 0.59% AbstractParameterisedSystem::SetAnyVariable 35ms 0.24% 84.42% 85ms 0.58% ompi_datatype_set_args 68ms 0.46% 84.88% 84ms 0.57% AbstractParameterisedSystem::GetAnyVariable 48ms 0.33% 85.21% 83ms 0.56% TimeStepper::AdvanceOneTimeStep 1ms 0.0068% 85.21% 83ms 0.56% VecTDot 0 0% 85.21% 81ms 0.55% H5D__chunk_allocated 2ms 0.014% 85.23% 81ms 0.55% H5D__select_write 0 0% 85.23% 81ms 0.55% VecTDot_Seq 0 0% 85.23% 81ms 0.55% VecXDot_Seq_Private.constprop.0 1ms 0.0068% 85.23% 79ms 0.54% H5Dgather 0 0% 85.23% 77ms 0.52% H5D__contig_fill 3ms 0.02% 85.26% 77ms 0.52% H5VM_opvv 75ms 0.51% 85.76% 75ms 0.51% H5VM_array_offset_pre 75ms 0.51% 86.27% 75ms 0.51% asuint64 (inline) 0 0% 86.27% 74ms 0.5% H5D__contig_write