File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 436ms, 90.08% of 484ms total Dropped 200 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 476ms 98.35% __libc_start_call_main 0 0% 0% 476ms 98.35% __libc_start_main_impl 0 0% 0% 476ms 98.35% _start 0 0% 0% 473ms 97.73% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 473ms 97.73% CxxTest::TestRunner::runAllTests 0 0% 0% 473ms 97.73% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 473ms 97.73% main 0 0% 0% 432ms 89.26% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 89.26% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 89.05% CxxTest::RealTestDescription::run 0 0% 0% 431ms 89.05% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 89.05% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 426ms 88.02% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.81% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 384ms 79.34% KSPSolve 1ms 0.21% 0.21% 384ms 79.34% KSPSolve_Private 0 0% 0.21% 384ms 79.34% LinearSystem::Solve 0 0% 0.21% 382ms 78.93% KSPSolve_CG 0 0% 0.21% 230ms 47.52% KSP_PCApply.lto_priv.7 0 0% 0.21% 215ms 44.42% PCApply 0 0% 0.21% 215ms 44.42% PCApply_BJacobi_Singleblock 0 0% 0.21% 187ms 38.64% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 172ms 35.54% MatSolve 171ms 35.33% 35.54% 172ms 35.54% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.54% 172ms 35.54% PCApply_ICC 0 0% 35.54% 71ms 14.67% MatMult 0 0% 35.54% 71ms 14.67% MatMult_SeqAIJ 71ms 14.67% 50.21% 71ms 14.67% MatMult_SeqAIJ_Inode (inline) 53ms 10.95% 61.16% 53ms 10.95% ddot_ 1ms 0.21% 61.36% 45ms 9.30% MatNullSpaceRemove 0 0% 61.36% 38ms 7.85% CxxTest::RealWorldDescription::setUp 0 0% 61.36% 38ms 7.85% PMPI_Init_thread 0 0% 61.36% 38ms 7.85% PetscInitialize 0 0% 61.36% 38ms 7.85% PetscSetup::setUpWorld 0 0% 61.36% 38ms 7.85% PetscSetupUtils::CommonSetup 0 0% 61.36% 38ms 7.85% PetscSetupUtils::InitialisePetsc 0 0% 61.36% 38ms 7.85% ompi_mpi_init 2ms 0.41% 61.78% 36ms 7.44% AbstractCardiacTissue::SolveCellSystems 1ms 0.21% 61.98% 33ms 6.82% 0 0% 61.98% 32ms 6.61% VecTDot 0 0% 61.98% 32ms 6.61% VecTDot_Seq 0 0% 61.98% 32ms 6.61% VecXDot_Seq_Private.constprop.0 0 0% 61.98% 29ms 5.99% VecMDot 3ms 0.62% 62.60% 29ms 5.99% VecMXDot_Private 26ms 5.37% 67.98% 26ms 5.37% VecMDot_Seq 1ms 0.21% 68.18% 24ms 4.96% AbstractCardiacCell::ComputeExceptVoltage 0 0% 68.18% 24ms 4.96% orte_init 0 0% 68.18% 22ms 4.55% VecNorm 1ms 0.21% 68.39% 22ms 4.55% VecNorm_Seq 0 0% 68.39% 21ms 4.34% AbstractOneStepIvpOdeSolver::InternalSolve 5ms 1.03% 69.42% 20ms 4.13% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.42% 20ms 4.13% EulerIvpOdeSolver::CalculateNextYValue 0 0% 69.42% 18ms 3.72% KSP_PCApply (partial-inline) 7ms 1.45% 70.87% 17ms 3.51% __GI___exp 0 0% 70.87% 17ms 3.51% __GI__dl_catch_exception 0 0% 70.87% 17ms 3.51% _dl_catch_error 0 0% 70.87% 17ms 3.51% _dlerror_run 0 0% 70.87% 17ms 3.51% opal_stackframe_output 0 0% 70.87% 16ms 3.31% mca_base_framework_open 1ms 0.21% 71.07% 15ms 3.10% VecMAXPY 13ms 2.69% 73.76% 14ms 2.89% VecMAXPY_Seq 0 0% 73.76% 14ms 2.89% hwloc_topology_load 0 0% 73.76% 14ms 2.89% mca_base_framework_components_register 0 0% 73.76% 14ms 2.89% mca_base_framework_register 0 0% 73.76% 13ms 2.69% _dl_init 0 0% 73.76% 13ms 2.69% call_init (inline) 0 0% 73.76% 13ms 2.69% hwloc_linux_get_tid_last_cpu_location 0 0% 73.76% 12ms 2.48% VecAXPY 0 0% 73.76% 12ms 2.48% VecAXPY_Seq 0 0% 73.76% 12ms 2.48% VecAYPX 12ms 2.48% 76.24% 12ms 2.48% VecAYPX_Seq 0 0% 76.24% 12ms 2.48% ___dlopen 0 0% 76.24% 12ms 2.48% _dl_open 12ms 2.48% 78.72% 12ms 2.48% daxpy_ 0 0% 78.72% 12ms 2.48% dl_open_worker 0 0% 78.72% 12ms 2.48% dlopen_doit 0 0% 78.72% 12ms 2.48% dlopen_implementation (inline) 0 0% 78.72% 12ms 2.48% mca_base_component_find 0 0% 78.72% 12ms 2.48% mca_base_component_repository_open 10ms 2.07% 80.79% 10ms 2.07% __ieee754_exp_fma 0 0% 80.79% 8ms 1.65% _dl_start_user 2ms 0.41% 81.20% 8ms 1.65% boost::serialization::singleton::get_instance 0 0% 81.20% 8ms 1.65% mca_base_framework_components_open 0 0% 81.20% 7ms 1.45% VecDuplicate 1ms 0.21% 81.40% 7ms 1.45% VecDuplicate_Seq 0 0% 81.40% 7ms 1.45% dl_open_worker_begin 0 0% 81.40% 7ms 1.45% mca_topo_base_dist_graph_neighbors_count 0 0% 81.40% 6ms 1.24% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.41% 81.82% 6ms 1.24% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.21% 82.02% 6ms 1.24% __GI___libc_malloc 0 0% 82.02% 6ms 1.24% _dl_lookup_symbol_x 0 0% 82.02% 6ms 1.24% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.02% 6ms 1.24% opal_hwloc_base_get_topology 0 0% 82.02% 6ms 1.24% orte_ess_base_proc_binding 0 0% 82.02% 5ms 1.03% AbstractCardiacProblem::Initialise 0 0% 82.02% 5ms 1.03% KSPConvergedDefault 0 0% 82.02% 5ms 1.03% __dlclose 5ms 1.03% 83.06% 5ms 1.03% __libc_openat64 0 0% 83.06% 5ms 1.03% _dl_close 1ms 0.21% 83.26% 5ms 1.03% _dl_close_worker (inline) 5ms 1.03% 84.30% 5ms 1.03% _int_malloc 0 0% 84.30% 5ms 1.03% mca_base_component_repository_release 0 0% 84.30% 4ms 0.83% BidomainSolver::SetupLinearSystem 2ms 0.41% 84.71% 4ms 0.83% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.21% 84.92% 4ms 0.83% VecSet 4ms 0.83% 85.74% 4ms 0.83% __GI___clock_nanosleep 4ms 0.83% 86.57% 4ms 0.83% __GI___libc_read 0 0% 86.57% 4ms 0.83% __GI___nanosleep 1ms 0.21% 86.78% 4ms 0.83% __cxa_finalize 0 0% 86.78% 4ms 0.83% _dl_call_fini 0 0% 86.78% 4ms 0.83% _dl_fixup 0 0% 86.78% 4ms 0.83% _dl_open_relocate_one_object (inline) 0 0% 86.78% 4ms 0.83% _dl_relocate_object 0 0% 86.78% 4ms 0.83% _dl_runtime_resolve_xsavec 0 0% 86.78% 4ms 0.83% mca_base_components_close 0 0% 86.78% 4ms 0.83% usleep 0 0% 86.78% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 86.78% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 86.78% 3ms 0.62% PetscFinalize 2ms 0.41% 87.19% 3ms 0.62% PetscMallocA 0 0% 87.19% 3ms 0.62% PetscMemcpy (inline) 0 0% 87.19% 3ms 0.62% PetscMemzero (inline) 0 0% 87.19% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 87.19% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 87.19% 3ms 0.62% VecCreate 0 0% 87.19% 3ms 0.62% VecCreate_Seq 0 0% 87.19% 3ms 0.62% VecSetType 0 0% 87.19% 3ms 0.62% VecSet_Seq (partial-inline) 0 0% 87.19% 3ms 0.62% XOpenDisplay 0 0% 87.19% 3ms 0.62% [hwloc_gl.so] 0 0% 87.19% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 87.19% 3ms 0.62% _XConnectXCB 0 0% 87.19% 3ms 0.62% __GI_exit 3ms 0.62% 87.81% 3ms 0.62% __memcpy_avx_unaligned_erms 3ms 0.62% 88.43% 3ms 0.62% __memset_avx2_unaligned_erms 0 0% 88.43% 3ms 0.62% __run_exit_handlers 0 0% 88.43% 3ms 0.62% _dl_fini 0 0% 88.43% 3ms 0.62% _dl_map_object 3ms 0.62% 89.05% 3ms 0.62% _dl_new_hash (inline) 0 0% 89.05% 3ms 0.62% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 2ms 0.41% 89.46% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 89.46% 3ms 0.62% boost::serialization::singleton::get_const_instance (inline) 3ms 0.62% 90.08% 3ms 0.62% do_lookup_x 0 0% 90.08% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 90.08% 3ms 0.62% ompi_mpi_finalize 0 0% 90.08% 3ms 0.62% operator new 0 0% 90.08% 3ms 0.62% xcb_connect_to_display_with_auth_info