File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 123113ms, 91.49% of 134570ms total Dropped 1193 nodes (cum <= 672.85ms) flat flat% sum% cum cum% 0 0% 0% 134555ms 100% __libc_start_call_main 0 0% 0% 134555ms 100% __libc_start_main_impl 0 0% 0% 134555ms 100% _start 0 0% 0% 134551ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 134551ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 134551ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 134551ms 100% main 0 0% 0% 134507ms 100% CxxTest::RealTestDescription::run 0 0% 0% 134507ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 134507ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 134507ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 134507ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 134505ms 100% AbstractConvergenceTester::Converge 3ms 0.0022% 0.0022% 133324ms 99.07% AbstractCardiacProblem::Solve 12ms 0.0089% 0.011% 132439ms 98.42% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0067% 0.018% 74133ms 55.09% LinearSystem::Solve 2ms 0.0015% 0.019% 73569ms 54.67% KSPSolve 11ms 0.0082% 0.027% 73567ms 54.67% KSPSolve_Private 13ms 0.0097% 0.037% 73255ms 54.44% KSPSolve_SYMMLQ 533ms 0.4% 0.43% 48406ms 35.97% AbstractCardiacTissue::SolveCellSystems 10ms 0.0074% 0.44% 40572ms 30.15% PCApply 8ms 0.0059% 0.45% 40543ms 30.13% PCApply_BJacobi_Singleblock 4ms 0.003% 0.45% 38083ms 28.30% KSPSolve_PREONLY (partial-inline) 1183ms 0.88% 1.33% 37373ms 27.77% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.003% 1.33% 37038ms 27.52% PCApply_ICC 6ms 0.0045% 1.34% 37034ms 27.52% MatSolve 36585ms 27.19% 28.52% 37028ms 27.52% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 5ms 0.0037% 28.53% 34899ms 25.93% KSP_PCApply.lto_priv.18 7710ms 5.73% 34.26% 32935ms 24.47% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 17ms 0.013% 34.27% 26404ms 19.62% MatMult 303ms 0.23% 34.49% 26387ms 19.61% MatMult_SeqAIJ (partial-inline) 25873ms 19.23% 53.72% 26382ms 19.60% MatMult_SeqAIJ_Inode (inline) 2260ms 1.68% 55.40% 16738ms 12.44% CardiacNewtonSolver::Solve 5600ms 4.16% 59.56% 9938ms 7.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 337ms 0.25% 59.81% 9454ms 7.03% AbstractCardiacTissue::UpdateCaches (inline) 1136ms 0.84% 60.66% 9201ms 6.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1228ms 0.91% 61.57% 8650ms 6.43% BidomainSolver::SetupLinearSystem 1943ms 1.44% 63.01% 8568ms 6.37% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 7762ms 5.77% 68.78% 7762ms 5.77% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 4ms 0.003% 68.78% 7671ms 5.70% KSP_PCApply (partial-inline) 6ms 0.0045% 68.79% 7253ms 5.39% KSPConvergedDefault 4095ms 3.04% 71.83% 4180ms 3.11% __ieee754_log_fma 0 0% 71.83% 4091ms 3.04% boost::numeric::ublas::norm_inf (inline) 2792ms 2.07% 73.91% 4091ms 3.04% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.91% 4091ms 3.04% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.91% 4091ms 3.04% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3601ms 2.68% 76.58% 3601ms 2.68% ddot_ 5ms 0.0037% 76.58% 3302ms 2.45% MatNullSpaceRemove 2007ms 1.49% 78.08% 3075ms 2.29% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 33ms 0.025% 78.10% 3022ms 2.25% std::pow (inline) 3002ms 2.23% 80.33% 3002ms 2.23% __memcpy_avx_unaligned_erms 10ms 0.0074% 80.34% 3000ms 2.23% VecDot 1ms 0.00074% 80.34% 2990ms 2.22% VecDot_Seq 1ms 0.00074% 80.34% 2989ms 2.22% VecXDot_Seq_Private.constprop.0 413ms 0.31% 80.65% 2978ms 2.21% __pow 0 0% 80.65% 2976ms 2.21% PetscMemcpy (inline) 21ms 0.016% 80.66% 2632ms 1.96% VecAXPY 5ms 0.0037% 80.67% 2611ms 1.94% VecAXPY_Seq 2583ms 1.92% 82.59% 2583ms 1.92% daxpy_ 24ms 0.018% 82.60% 2555ms 1.90% VecCopy 335ms 0.25% 82.85% 2531ms 1.88% __ieee754_pow_fma 1ms 0.00074% 82.85% 2530ms 1.88% VecCopy_Seq (partial-inline) 0 0% 82.85% 2067ms 1.54% AbstractFeVolumeIntegralAssembler::DoAssemble 5ms 0.0037% 82.86% 1989ms 1.48% VecMDot 13ms 0.0097% 82.87% 1984ms 1.47% VecMXDot_Private 1959ms 1.46% 84.32% 1967ms 1.46% VecMDot_Seq 31ms 0.023% 84.35% 1756ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1489ms 1.11% 85.45% 1531ms 1.14% exp_inline (inline) 0 0% 85.45% 1413ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 9ms 0.0067% 85.46% 1308ms 0.97% VecMAXPY 1293ms 0.96% 86.42% 1299ms 0.97% VecMAXPY_Seq 1298ms 0.96% 87.38% 1298ms 0.96% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 87.38% 1286ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.38% 1286ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.38% 1286ms 0.96% boost_numeric_ublas_abs (inline) 1286ms 0.96% 88.34% 1286ms 0.96% std::abs (inline) 814ms 0.6% 88.94% 1158ms 0.86% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 15ms 0.011% 88.96% 1148ms 0.85% boost::numeric::ublas::matrix_assign (inline) 262ms 0.19% 89.15% 1122ms 0.83% boost::numeric::ublas::indexing_matrix_assign 1098ms 0.82% 89.97% 1098ms 0.82% [libchaste_heart.so] 0 0% 89.97% 1013ms 0.75% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.97% 1013ms 0.75% CuboidMeshConstructor::Construct 5ms 0.0037% 89.97% 1013ms 0.75% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0015% 89.97% 913ms 0.68% VecNorm 10ms 0.0074% 89.98% 907ms 0.67% VecScale 1ms 0.00074% 89.98% 900ms 0.67% VecNorm_Seq 1ms 0.00074% 89.98% 898ms 0.67% Element::Element 3ms 0.0022% 89.98% 897ms 0.67% VecScale_Seq 3ms 0.0022% 89.99% 894ms 0.66% AbstractBidomainSolver::FinaliseLinearSystem 891ms 0.66% 90.65% 891ms 0.66% dscal_ 263ms 0.2% 90.84% 887ms 0.66% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0022% 90.84% 885ms 0.66% AbstractTetrahedralElement::CalculateJacobian 10ms 0.0074% 90.85% 880ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0037% 90.86% 869ms 0.65% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 90.86% 841ms 0.62% AbstractTetrahedralElement::AbstractTetrahedralElement 839ms 0.62% 91.48% 839ms 0.62% __memset_avx2_unaligned_erms 0 0% 91.48% 824ms 0.61% PetscMemzero (inline) 5ms 0.0037% 91.48% 812ms 0.6% VecDuplicate 2ms 0.0015% 91.49% 805ms 0.6% BidomainProblem::WriteOneStep