File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12782ms, 86.06% of 14852ms total Dropped 734 nodes (cum <= 74.26ms) flat flat% sum% cum cum% 0 0% 0% 14842ms 99.93% __libc_start_call_main 0 0% 0% 14842ms 99.93% __libc_start_main_impl 0 0% 0% 14842ms 99.93% _start 0 0% 0% 14838ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14838ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14838ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14838ms 99.91% main 0 0% 0% 14800ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14800ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14800ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14778ms 99.50% AbstractCardiacProblem::Solve 1ms 0.0067% 0.0067% 11291ms 76.02% AbstractDynamicLinearPdeSolver::Solve 67ms 0.45% 0.46% 8857ms 59.64% AbstractCardiacTissue::SolveCellSystems 101ms 0.68% 1.14% 5290ms 35.62% AbstractCardiacCell::ComputeExceptVoltage 102ms 0.69% 1.82% 4664ms 31.40% AbstractOneStepIvpOdeSolver::InternalSolve 143ms 0.96% 2.79% 3962ms 26.68% EulerIvpOdeSolver::CalculateNextYValue 833ms 5.61% 8.40% 3772ms 25.40% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1761ms 11.86% 20.25% 3492ms 23.51% __GI___exp 1ms 0.0067% 20.26% 3422ms 23.04% MonodomainProblem::WriteOneStep 0 0% 20.26% 3258ms 21.94% H5Dwrite 2ms 0.013% 20.27% 3255ms 21.92% Hdf5DataWriter::PutVector 5ms 0.034% 20.31% 3222ms 21.69% H5D__write 116ms 0.78% 21.09% 2871ms 19.33% AbstractCardiacTissue::UpdateCaches (inline) 792ms 5.33% 26.42% 2676ms 18.02% CellLuoRudy1991FromCellML::GetIIonic 0 0% 26.42% 2008ms 13.52% H5D__chunk_collective_write 20ms 0.13% 26.56% 2008ms 13.52% H5F_set_coll_metadata_reads 18ms 0.12% 26.68% 1803ms 12.14% H5FD_s3comms_uriencode 3ms 0.02% 26.70% 1687ms 11.36% LinearSystem::Solve 1354ms 9.12% 35.81% 1652ms 11.12% __ieee754_exp_fma 0 0% 35.81% 1548ms 10.42% KSPSolve 5ms 0.034% 35.85% 1548ms 10.42% KSPSolve_Private 2ms 0.013% 35.86% 1532ms 10.32% KSPSolve_CG 56ms 0.38% 36.24% 1422ms 9.57% 3ms 0.02% 36.26% 1414ms 9.52% H5F_block_write 1ms 0.0067% 36.26% 1411ms 9.50% H5PB_write 2ms 0.013% 36.28% 1410ms 9.49% H5F__accum_write 0 0% 36.28% 1408ms 9.48% H5FD_write 1ms 0.0067% 36.28% 1299ms 8.75% H5D__mpio_select_write 1ms 0.0067% 36.29% 1180ms 7.95% PMPI_File_write_at_all 1160ms 7.81% 44.10% 1162ms 7.82% __GI_pwritev64 5ms 0.034% 44.14% 1080ms 7.27% H5D__chunk_cacheable 8ms 0.054% 44.19% 1019ms 6.86% std::pow (inline) 117ms 0.79% 44.98% 1010ms 6.80% __pow 318ms 2.14% 47.12% 939ms 6.32% H5S_select_iterate 91ms 0.61% 47.73% 893ms 6.01% __ieee754_pow_fma 1ms 0.0067% 47.74% 879ms 5.92% PCApply 3ms 0.02% 47.76% 874ms 5.88% PCApply_BJacobi_Singleblock 0 0% 47.76% 830ms 5.59% KSPSolve_PREONLY 1ms 0.0067% 47.76% 827ms 5.57% PCApply_ICC 2ms 0.013% 47.78% 826ms 5.56% MatSolve 814ms 5.48% 53.26% 824ms 5.55% MatSolve_SeqSBAIJ_1_NaturalOrdering 328ms 2.21% 55.47% 719ms 4.84% MonodomainSolver::SetupLinearSystem 78ms 0.53% 55.99% 626ms 4.21% H5D__chunk_set_sizes 1ms 0.0067% 56.00% 625ms 4.21% KSP_PCApply.lto_priv.7 5ms 0.034% 56.03% 592ms 3.99% MatMult 587ms 3.95% 59.99% 587ms 3.95% MatMult_SeqAIJ 67ms 0.45% 60.44% 494ms 3.33% H5S_mpio_space_type 209ms 1.41% 61.84% 456ms 3.07% CellLuoRudy1991FromCellML::VerifyStateVariables 448ms 3.02% 64.86% 448ms 3.02% log_inline (inline) 1ms 0.0067% 64.87% 329ms 2.22% KSPConvergedDefault 299ms 2.01% 66.88% 317ms 2.13% exp_inline (inline) 95ms 0.64% 67.52% 281ms 1.89% TimeStepper::TimeStepper 0 0% 67.52% 256ms 1.72% KSP_PCApply 189ms 1.27% 68.79% 252ms 1.70% top12 (inline) 224ms 1.51% 70.30% 224ms 1.51% [libchaste_heart.so] 48ms 0.32% 70.62% 208ms 1.40% __GI___libc_malloc 13ms 0.088% 70.71% 207ms 1.39% H5VM_chunk_index 146ms 0.98% 71.69% 191ms 1.29% _int_malloc 189ms 1.27% 72.97% 189ms 1.27% TimeStepper::CalculateNextTime 33ms 0.22% 73.19% 189ms 1.27% __GI___libc_free 12ms 0.081% 73.27% 184ms 1.24% ompi_datatype_destroy 7ms 0.047% 73.32% 177ms 1.19% MPI_Type_free 176ms 1.19% 74.50% 176ms 1.19% ddot_ 11ms 0.074% 74.58% 174ms 1.17% ompi_datatype_create 53ms 0.36% 74.93% 169ms 1.14% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.0067% 74.94% 166ms 1.12% Hdf5DataWriter::PutUnlimitedVariable 164ms 1.10% 76.04% 164ms 1.10% asuint64 (inline) 64ms 0.43% 76.47% 156ms 1.05% _int_free 39ms 0.26% 76.74% 153ms 1.03% ompi_datatype_release_args 7ms 0.047% 76.78% 153ms 1.03% ompi_info_register_framework_params 96ms 0.65% 77.43% 135ms 0.91% AbstractOneStepIvpOdeSolver::Solve 0 0% 77.43% 130ms 0.88% PMPI_File_set_view 60ms 0.4% 77.83% 128ms 0.86% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 77.83% 127ms 0.86% VecDuplicate 7ms 0.047% 77.88% 127ms 0.86% VecDuplicate_MPI 26ms 0.18% 78.06% 126ms 0.85% H5S_set_version 4ms 0.027% 78.08% 124ms 0.83% PMPI_Type_create_resized 124ms 0.83% 78.92% 124ms 0.83% __memcpy_avx_unaligned_erms 120ms 0.81% 79.73% 120ms 0.81% __ieee754_log_fma 4ms 0.027% 79.75% 119ms 0.8% ompi_datatype_duplicate 50ms 0.34% 80.09% 114ms 0.77% H5S_hyper_add_span_element 110ms 0.74% 80.83% 110ms 0.74% std::isinf (inline) 95ms 0.64% 81.47% 109ms 0.73% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0067% 81.48% 108ms 0.73% VecNorm 2ms 0.013% 81.49% 105ms 0.71% VecTDot 1ms 0.0067% 81.50% 104ms 0.7% VecNorm_Seq 0 0% 81.50% 103ms 0.69% VecTDot_Seq 1ms 0.0067% 81.50% 103ms 0.69% VecXDot_Seq_Private.constprop.0 102ms 0.69% 82.19% 102ms 0.69% H5VM_chunk_index_scaled 80ms 0.54% 82.73% 101ms 0.68% AbstractParameterisedSystem::GetAnyVariable 37ms 0.25% 82.98% 100ms 0.67% H5VM_array_calc 71ms 0.48% 83.46% 92ms 0.62% AbstractParameterisedSystem::SetAnyVariable 92ms 0.62% 84.08% 92ms 0.62% H5VM_array_offset_pre 48ms 0.32% 84.40% 92ms 0.62% TimeStepper::AdvanceOneTimeStep 0 0% 84.40% 91ms 0.61% H5D__chunk_allocated 1ms 0.0067% 84.41% 91ms 0.61% H5D__select_write 2ms 0.013% 84.42% 90ms 0.61% H5Dgather 0 0% 84.42% 88ms 0.59% H5D__contig_fill 0 0% 84.42% 88ms 0.59% H5D__contig_write 0 0% 84.42% 88ms 0.59% H5VM_opvv 0 0% 84.42% 83ms 0.56% PMPI_File_write_at 0 0% 84.42% 83ms 0.56% std::vector::_M_assign_aux (inline) 0 0% 84.42% 83ms 0.56% std::vector::assign (inline) 27ms 0.18% 84.60% 80ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 79ms 0.53% 85.13% 79ms 0.53% [libm.so.6] 29ms 0.2% 85.33% 79ms 0.53% ompi_datatype_set_args 24ms 0.16% 85.49% 78ms 0.53% __libc_calloc 9ms 0.061% 85.55% 77ms 0.52% std::__copy_move::__copy_m (inline) 0 0% 85.55% 77ms 0.52% std::__copy_move_a (inline) 0 0% 85.55% 77ms 0.52% std::__copy_move_a1 (inline) 0 0% 85.55% 77ms 0.52% std::__copy_move_a2 (inline) 0 0% 85.55% 77ms 0.52% std::copy (inline) 76ms 0.51% 86.06% 76ms 0.51% std::vector::operator[] (inline)