File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109594ms, 91.79% of 119392ms total Dropped 1134 nodes (cum <= 596.96ms) flat flat% sum% cum cum% 0 0% 0% 119379ms 100% __libc_start_call_main 0 0% 0% 119379ms 100% __libc_start_main_impl 0 0% 0% 119379ms 100% _start 0 0% 0% 119376ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119376ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119376ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119376ms 100% main 0 0% 0% 119344ms 100% AbstractConvergenceTester::Converge 0 0% 0% 119344ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119344ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119344ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119344ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119344ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 6ms 0.005% 0.005% 118098ms 98.92% AbstractCardiacProblem::Solve 2ms 0.0017% 0.0067% 117364ms 98.30% AbstractDynamicLinearPdeSolver::Solve 11ms 0.0092% 0.016% 65830ms 55.14% LinearSystem::Solve 1ms 0.00084% 0.017% 65314ms 54.71% KSPSolve 12ms 0.01% 0.027% 65313ms 54.70% KSPSolve_Private 12ms 0.01% 0.037% 64876ms 54.34% KSPSolve_SYMMLQ 172ms 0.14% 0.18% 42650ms 35.72% AbstractCardiacTissue::SolveCellSystems 3ms 0.0025% 0.18% 37173ms 31.14% PCApply 6ms 0.005% 0.19% 37164ms 31.13% PCApply_BJacobi_Singleblock 0 0% 0.19% 34424ms 28.83% KSPSolve_PREONLY (partial-inline) 1ms 0.00084% 0.19% 33289ms 27.88% PCApply_ICC 9ms 0.0075% 0.2% 33288ms 27.88% MatSolve 32843ms 27.51% 27.71% 33279ms 27.87% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1338ms 1.12% 28.83% 32751ms 27.43% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0025% 28.83% 32187ms 26.96% KSP_PCApply.lto_priv.18 6841ms 5.73% 34.56% 28407ms 23.79% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 5ms 0.0042% 34.56% 21926ms 18.36% MatMult 270ms 0.23% 34.79% 21921ms 18.36% MatMult_SeqAIJ (partial-inline) 21433ms 17.95% 52.74% 21920ms 18.36% MatMult_SeqAIJ_Inode (inline) 1979ms 1.66% 54.40% 14753ms 12.36% CardiacNewtonSolver::Solve 352ms 0.29% 54.69% 9088ms 7.61% AbstractCardiacTissue::UpdateCaches (inline) 4458ms 3.73% 58.43% 8663ms 7.26% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1928ms 1.61% 60.04% 8540ms 7.15% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1119ms 0.94% 60.98% 7840ms 6.57% BidomainSolver::SetupLinearSystem 1198ms 1.00% 61.98% 7421ms 6.22% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00084% 61.98% 7041ms 5.90% KSP_PCApply (partial-inline) 5ms 0.0042% 61.99% 6460ms 5.41% KSPConvergedDefault 5956ms 4.99% 66.98% 5956ms 4.99% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3918ms 3.28% 70.26% 3963ms 3.32% __ieee754_log_fma 0 0% 70.26% 3688ms 3.09% boost::numeric::ublas::norm_inf (inline) 2501ms 2.09% 72.35% 3688ms 3.09% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.35% 3688ms 3.09% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.35% 3688ms 3.09% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0059% 72.36% 3469ms 2.91% MatNullSpaceRemove 35ms 0.029% 72.39% 3187ms 2.67% std::pow (inline) 395ms 0.33% 72.72% 3150ms 2.64% __pow 3047ms 2.55% 75.27% 3047ms 2.55% __memcpy_avx_unaligned_erms 0 0% 75.27% 3013ms 2.52% PetscMemcpy (inline) 1667ms 1.40% 76.67% 2833ms 2.37% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 407ms 0.34% 77.01% 2745ms 2.30% __ieee754_pow_fma 2731ms 2.29% 79.30% 2731ms 2.29% ddot_ 24ms 0.02% 79.32% 2614ms 2.19% VecCopy 2ms 0.0017% 79.32% 2583ms 2.16% VecCopy_Seq (partial-inline) 16ms 0.013% 79.33% 2487ms 2.08% VecAXPY 7ms 0.0059% 79.34% 2471ms 2.07% VecAXPY_Seq 2455ms 2.06% 81.39% 2455ms 2.06% daxpy_ 8ms 0.0067% 81.40% 2207ms 1.85% VecDot 1ms 0.00084% 81.40% 2199ms 1.84% VecDot_Seq 4ms 0.0034% 81.40% 2198ms 1.84% VecXDot_Seq_Private.constprop.0 4ms 0.0034% 81.41% 2096ms 1.76% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.41% 2035ms 1.70% VecMDot 14ms 0.012% 81.42% 2035ms 1.70% VecMXDot_Private 2004ms 1.68% 83.10% 2015ms 1.69% VecMDot_Seq 38ms 0.032% 83.13% 1763ms 1.48% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1556ms 1.30% 84.43% 1614ms 1.35% exp_inline (inline) 1457ms 1.22% 85.65% 1457ms 1.22% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 6ms 0.005% 85.66% 1427ms 1.20% VecMAXPY 0 0% 85.66% 1424ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1410ms 1.18% 86.84% 1421ms 1.19% VecMAXPY_Seq 1199ms 1.00% 87.84% 1199ms 1.00% __memset_avx2_unaligned_erms 0 0% 87.84% 1189ms 1% PetscMemzero (inline) 7ms 0.0059% 87.85% 1116ms 0.93% boost::numeric::ublas::matrix_assign (inline) 207ms 0.17% 88.02% 1105ms 0.93% boost::numeric::ublas::indexing_matrix_assign 854ms 0.72% 88.74% 1104ms 0.92% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.74% 1098ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.74% 1098ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.74% 1098ms 0.92% boost_numeric_ublas_abs (inline) 1098ms 0.92% 89.66% 1098ms 0.92% std::abs (inline) 0 0% 89.66% 1093ms 0.92% CuboidMeshConstructor::Construct 0 0% 89.66% 1092ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00084% 89.66% 1092ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.0034% 89.66% 1012ms 0.85% VecDuplicate 2ms 0.0017% 89.66% 992ms 0.83% Element::Element 5ms 0.0042% 89.67% 981ms 0.82% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.67% 942ms 0.79% AbstractTetrahedralElement::AbstractTetrahedralElement 4ms 0.0034% 89.67% 855ms 0.72% BidomainAssembler::ComputeMatrixTerm 16ms 0.013% 89.69% 847ms 0.71% PetscMallocA 12ms 0.01% 89.70% 839ms 0.7% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0042% 89.70% 831ms 0.7% PetscMallocAlign (partial-inline) 1ms 0.00084% 89.70% 820ms 0.69% VecNorm 4ms 0.0034% 89.70% 819ms 0.69% VecScale 2ms 0.0017% 89.71% 815ms 0.68% VecNorm_Seq 1ms 0.00084% 89.71% 815ms 0.68% VecScale_Seq 813ms 0.68% 90.39% 813ms 0.68% dscal_ 799ms 0.67% 91.06% 799ms 0.67% [libchaste_heart.so] 196ms 0.16% 91.22% 737ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.22% 737ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 680ms 0.57% 91.79% 680ms 0.57% log_inline (inline) 0 0% 91.79% 676ms 0.57% BidomainProblem::WriteOneStep 0 0% 91.79% 672ms 0.56% AbstractFeAssemblerInterface::Assemble (inline) 4ms 0.0034% 91.79% 643ms 0.54% VecDuplicate_Seq