File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12591ms, 86.39% of 14575ms total Dropped 745 nodes (cum <= 72.88ms) flat flat% sum% cum cum% 0 0% 0% 14566ms 99.94% __libc_start_call_main 0 0% 0% 14566ms 99.94% __libc_start_main_impl 0 0% 0% 14566ms 99.94% _start 0 0% 0% 14563ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14563ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14563ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14563ms 99.92% main 0 0% 0% 14530ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14530ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14530ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0069% 0.0069% 14509ms 99.55% AbstractCardiacProblem::Solve 0 0% 0.0069% 11323ms 77.69% AbstractDynamicLinearPdeSolver::Solve 34ms 0.23% 0.24% 8977ms 61.59% AbstractCardiacTissue::SolveCellSystems 99ms 0.68% 0.92% 5426ms 37.23% AbstractCardiacCell::ComputeExceptVoltage 73ms 0.5% 1.42% 4728ms 32.44% AbstractOneStepIvpOdeSolver::InternalSolve 145ms 0.99% 2.42% 4104ms 28.16% EulerIvpOdeSolver::CalculateNextYValue 905ms 6.21% 8.62% 3908ms 26.81% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1784ms 12.24% 20.86% 3574ms 24.52% __GI___exp 0 0% 20.86% 3122ms 21.42% MonodomainProblem::WriteOneStep 2ms 0.014% 20.88% 2983ms 20.47% Hdf5DataWriter::PutVector 2ms 0.014% 20.89% 2972ms 20.39% H5Dwrite 5ms 0.034% 20.93% 2944ms 20.20% H5D__write 101ms 0.69% 21.62% 2679ms 18.38% AbstractCardiacTissue::UpdateCaches (inline) 808ms 5.54% 27.16% 2546ms 17.47% CellLuoRudy1991FromCellML::GetIIonic 1548ms 10.62% 37.78% 1716ms 11.77% __ieee754_exp_fma 0 0% 37.78% 1653ms 11.34% H5D__chunk_collective_write 18ms 0.12% 37.91% 1653ms 11.34% H5F_set_coll_metadata_reads 3ms 0.021% 37.93% 1454ms 9.98% LinearSystem::Solve 24ms 0.16% 38.09% 1408ms 9.66% H5FD_s3comms_uriencode 0 0% 38.09% 1376ms 9.44% KSPSolve 7ms 0.048% 38.14% 1376ms 9.44% KSPSolve_Private 2ms 0.014% 38.15% 1367ms 9.38% KSPSolve_CG 11ms 0.075% 38.23% 1188ms 8.15% H5D__chunk_cacheable 42ms 0.29% 38.52% 1065ms 7.31% 0 0% 38.52% 1063ms 7.29% H5F_block_write 3ms 0.021% 38.54% 1063ms 7.29% H5PB_write 1ms 0.0069% 38.55% 1060ms 7.27% H5F__accum_write 2ms 0.014% 38.56% 1059ms 7.27% H5FD_write 431ms 2.96% 41.52% 1002ms 6.87% H5S_select_iterate 0 0% 41.52% 984ms 6.75% H5D__mpio_select_write 7ms 0.048% 41.56% 902ms 6.19% std::pow (inline) 97ms 0.67% 42.23% 894ms 6.13% __pow 0 0% 42.23% 887ms 6.09% PMPI_File_write_at_all 423ms 2.90% 45.13% 873ms 5.99% MonodomainSolver::SetupLinearSystem 865ms 5.93% 51.07% 867ms 5.95% __GI_pwritev64 128ms 0.88% 51.95% 793ms 5.44% __ieee754_pow_fma 1ms 0.0069% 51.95% 750ms 5.15% PCApply 1ms 0.0069% 51.96% 744ms 5.10% PCApply_BJacobi_Singleblock 0 0% 51.96% 710ms 4.87% KSPSolve_PREONLY 1ms 0.0069% 51.97% 707ms 4.85% PCApply_ICC 0 0% 51.97% 706ms 4.84% MatSolve 697ms 4.78% 56.75% 706ms 4.84% MatSolve_SeqSBAIJ_1_NaturalOrdering 354ms 2.43% 59.18% 685ms 4.70% CellLuoRudy1991FromCellML::VerifyStateVariables 78ms 0.54% 59.71% 593ms 4.07% H5D__chunk_set_sizes 4ms 0.027% 59.74% 557ms 3.82% MatMult 551ms 3.78% 63.52% 553ms 3.79% MatMult_SeqAIJ 50ms 0.34% 63.86% 436ms 2.99% H5S_mpio_space_type 1ms 0.0069% 63.87% 436ms 2.99% KSP_PCApply.lto_priv.7 0 0% 63.87% 408ms 2.80% KSPConvergedDefault 373ms 2.56% 66.43% 373ms 2.56% log_inline (inline) 0 0% 66.43% 315ms 2.16% KSP_PCApply 277ms 1.90% 68.33% 278ms 1.91% exp_inline (inline) 130ms 0.89% 69.22% 243ms 1.67% TimeStepper::TimeStepper 41ms 0.28% 69.50% 203ms 1.39% __GI___libc_malloc 198ms 1.36% 70.86% 198ms 1.36% [libchaste_heart.so] 158ms 1.08% 71.95% 195ms 1.34% AbstractOneStepIvpOdeSolver::Solve 14ms 0.096% 72.04% 192ms 1.32% H5VM_chunk_index 12ms 0.082% 72.12% 191ms 1.31% ompi_datatype_destroy 7ms 0.048% 72.17% 190ms 1.30% MPI_Type_free 44ms 0.3% 72.47% 189ms 1.30% __GI___libc_free 96ms 0.66% 73.13% 180ms 1.23% top12 (inline) 139ms 0.95% 74.09% 179ms 1.23% _int_malloc 39ms 0.27% 74.35% 163ms 1.12% ompi_datatype_release_args 5ms 0.034% 74.39% 163ms 1.12% ompi_info_register_framework_params 75ms 0.51% 74.90% 157ms 1.08% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 154ms 1.06% 75.96% 154ms 1.06% ddot_ 152ms 1.04% 77.00% 152ms 1.04% std::isinf (inline) 136ms 0.93% 77.93% 149ms 1.02% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 62ms 0.43% 78.36% 145ms 0.99% _int_free 1ms 0.0069% 78.37% 139ms 0.95% Hdf5DataWriter::PutUnlimitedVariable 8ms 0.055% 78.42% 137ms 0.94% ompi_datatype_create 25ms 0.17% 78.59% 130ms 0.89% AbstractCardiacCell::SetVoltage (partial-inline) 121ms 0.83% 79.42% 121ms 0.83% __ieee754_log_fma 18ms 0.12% 79.55% 120ms 0.82% H5S_set_version 116ms 0.8% 80.34% 116ms 0.8% TimeStepper::CalculateNextTime 4ms 0.027% 80.37% 113ms 0.78% PMPI_File_set_view 37ms 0.25% 80.62% 111ms 0.76% std::__cxx11::basic_string::basic_string 5ms 0.034% 80.66% 104ms 0.71% PMPI_Type_create_resized 103ms 0.71% 81.37% 103ms 0.71% __memcpy_avx_unaligned_erms 1ms 0.0069% 81.37% 103ms 0.71% ompi_datatype_duplicate 36ms 0.25% 81.62% 102ms 0.7% H5VM_array_calc 48ms 0.33% 81.95% 99ms 0.68% H5S_hyper_add_span_element 2ms 0.014% 81.96% 92ms 0.63% VecNorm 89ms 0.61% 82.57% 89ms 0.61% H5VM_array_offset_pre 89ms 0.61% 83.18% 89ms 0.61% H5VM_chunk_index_scaled 78ms 0.54% 83.72% 87ms 0.6% AbstractParameterisedSystem::SetAnyVariable 87ms 0.6% 84.32% 87ms 0.6% asuint64 (inline) 1ms 0.0069% 84.32% 85ms 0.58% VecNorm_Seq 0 0% 84.32% 85ms 0.58% VecTDot 0 0% 84.32% 85ms 0.58% VecTDot_Seq 0 0% 84.32% 85ms 0.58% VecXDot_Seq_Private.constprop.0 66ms 0.45% 84.78% 83ms 0.57% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0069% 84.78% 83ms 0.57% VecDuplicate 1ms 0.0069% 84.79% 82ms 0.56% VecDuplicate_MPI 78ms 0.54% 85.32% 78ms 0.54% [libm.so.6] 9ms 0.062% 85.39% 75ms 0.51% std::vector::_M_assign_aux (inline) 0 0% 85.39% 75ms 0.51% std::vector::assign (inline) 73ms 0.5% 85.89% 73ms 0.5% [libchaste_ode.so] 73ms 0.5% 86.39% 73ms 0.5% std::vector::operator[] (inline)