File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 427ms, 87.68% of 487ms total Dropped 179 nodes (cum <= 2.44ms) flat flat% sum% cum cum% 0 0% 0% 479ms 98.36% __libc_start_call_main 0 0% 0% 479ms 98.36% __libc_start_main_impl 0 0% 0% 479ms 98.36% _start 0 0% 0% 476ms 97.74% CxxTest::TestRunner::runAllTests 0 0% 0% 476ms 97.74% main 0 0% 0% 433ms 88.91% CxxTest::RealTestDescription::run 1ms 0.21% 0.21% 433ms 88.91% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0.21% 427ms 87.68% AbstractCardiacProblem::Solve 0 0% 0.21% 427ms 87.68% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.21% 385ms 79.06% LinearSystem::Solve 0 0% 0.21% 384ms 78.85% KSPSolve 0 0% 0.21% 384ms 78.85% KSPSolve_Private 0 0% 0.21% 383ms 78.64% KSPSolve_CG 0 0% 0.21% 236ms 48.46% KSP_PCApply.lto_priv.7 0 0% 0.21% 229ms 47.02% PCApply 0 0% 0.21% 228ms 46.82% PCApply_BJacobi_Singleblock 0 0% 0.21% 201ms 41.27% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 190ms 39.01% MatSolve 186ms 38.19% 38.40% 190ms 39.01% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 38.40% 190ms 39.01% PCApply_ICC 0 0% 38.40% 87ms 17.86% MatMult 1ms 0.21% 38.60% 87ms 17.86% MatMult_SeqAIJ (partial-inline) 86ms 17.66% 56.26% 87ms 17.86% MatMult_SeqAIJ_Inode (inline) 47ms 9.65% 65.91% 47ms 9.65% ddot_ 0 0% 65.91% 39ms 8.01% CxxTest::RealWorldDescription::setUp 0 0% 65.91% 39ms 8.01% PMPI_Init_thread 0 0% 65.91% 39ms 8.01% PetscInitialize 0 0% 65.91% 39ms 8.01% PetscSetup::setUpWorld 0 0% 65.91% 39ms 8.01% PetscSetupUtils::CommonSetup 0 0% 65.91% 39ms 8.01% PetscSetupUtils::InitialisePetsc 0 0% 65.91% 39ms 8.01% ompi_mpi_init 0 0% 65.91% 35ms 7.19% AbstractCardiacTissue::SolveCellSystems 0 0% 65.91% 33ms 6.78% 0 0% 65.91% 31ms 6.37% VecTDot 0 0% 65.91% 31ms 6.37% VecTDot_Seq 1ms 0.21% 66.12% 31ms 6.37% VecXDot_Seq_Private.constprop.0 0 0% 66.12% 28ms 5.75% MatNullSpaceRemove 0 0% 66.12% 25ms 5.13% orte_init 1ms 0.21% 66.32% 18ms 3.70% VecNorm 0 0% 66.32% 17ms 3.49% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.32% 17ms 3.49% VecNorm_Seq 0 0% 66.32% 16ms 3.29% hwloc_topology_load 0 0% 66.32% 15ms 3.08% AbstractOneStepIvpOdeSolver::InternalSolve 4ms 0.82% 67.15% 14ms 2.87% CellLuoRudy1991FromCellML::GetIIonic 0 0% 67.15% 14ms 2.87% VecMAXPY 14ms 2.87% 70.02% 14ms 2.87% VecMAXPY_Seq 0 0% 70.02% 14ms 2.87% VecMDot 13ms 2.67% 72.69% 14ms 2.87% VecMDot_Seq 0 0% 72.69% 14ms 2.87% VecMXDot_Private 1ms 0.21% 72.90% 14ms 2.87% hwloc_linux_get_tid_last_cpu_location 0 0% 72.90% 14ms 2.87% mca_base_framework_components_register 0 0% 72.90% 14ms 2.87% mca_base_framework_open 0 0% 72.90% 14ms 2.87% mca_base_framework_register 0 0% 72.90% 13ms 2.67% __GI__dl_catch_exception 0 0% 72.90% 13ms 2.67% _dl_catch_error 0 0% 72.90% 13ms 2.67% _dlerror_run 3ms 0.62% 73.51% 12ms 2.46% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 73.51% 12ms 2.46% EulerIvpOdeSolver::CalculateNextYValue 5ms 1.03% 74.54% 12ms 2.46% __GI___exp 0 0% 74.54% 12ms 2.46% ___dlopen 0 0% 74.54% 12ms 2.46% _dl_open 0 0% 74.54% 12ms 2.46% dl_open_worker 0 0% 74.54% 12ms 2.46% dlopen_doit 0 0% 74.54% 12ms 2.46% dlopen_implementation (inline) 0 0% 74.54% 11ms 2.26% KSP_PCApply (partial-inline) 0 0% 74.54% 11ms 2.26% opal_stackframe_output 0 0% 74.54% 10ms 2.05% VecAYPX 10ms 2.05% 76.59% 10ms 2.05% VecAYPX_Seq 10ms 2.05% 78.64% 10ms 2.05% __memset_avx2_unaligned_erms 0 0% 78.64% 10ms 2.05% dl_open_worker_begin 0 0% 78.64% 10ms 2.05% mca_base_component_find 0 0% 78.64% 10ms 2.05% mca_base_component_repository_open 0 0% 78.64% 9ms 1.85% PetscMemzero (inline) 0 0% 78.64% 9ms 1.85% VecDuplicate 0 0% 78.64% 9ms 1.85% _dl_init 0 0% 78.64% 9ms 1.85% call_init (inline) 0 0% 78.64% 8ms 1.64% PetscMallocA 0 0% 78.64% 8ms 1.64% PetscMallocAlign (partial-inline) 0 0% 78.64% 8ms 1.64% VecDuplicate_Seq 0 0% 78.64% 8ms 1.64% _dl_map_object 0 0% 78.64% 7ms 1.44% VecCreate_Seq 0 0% 78.64% 7ms 1.44% VecSetType 1ms 0.21% 78.85% 7ms 1.44% __GI___libc_malloc 0 0% 78.85% 7ms 1.44% _dl_start_user 1ms 0.21% 79.06% 6ms 1.23% BidomainSolver::SetupLinearSystem 0 0% 79.06% 6ms 1.23% PetscMemcpy (inline) 4ms 0.82% 79.88% 6ms 1.23% __ieee754_exp_fma 1ms 0.21% 80.08% 6ms 1.23% __pow 0 0% 80.08% 6ms 1.23% _dl_lookup_symbol_x 1ms 0.21% 80.29% 6ms 1.23% _dl_runtime_resolve_xsavec 0 0% 80.29% 6ms 1.23% opal_hwloc_base_get_topology 0 0% 80.29% 6ms 1.23% orte_ess_base_proc_binding 2ms 0.41% 80.70% 5ms 1.03% __ieee754_pow_fma 5ms 1.03% 81.72% 5ms 1.03% __memcpy_avx_unaligned_erms 1ms 0.21% 81.93% 5ms 1.03% _dl_fixup 1ms 0.21% 82.14% 5ms 1.03% _dl_map_object_from_fd 5ms 1.03% 83.16% 5ms 1.03% do_lookup_x 0 0% 83.16% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 83.16% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 83.16% 4ms 0.82% PetscFinalize 0 0% 83.16% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 83.16% 4ms 0.82% PetscSetupUtils::CommonFinalize 0 0% 83.16% 4ms 0.82% VecSet 0 0% 83.16% 4ms 0.82% VecSet_Seq (partial-inline) 0 0% 83.16% 4ms 0.82% XOpenDisplay 0 0% 83.16% 4ms 0.82% [hwloc_gl.so] 0 0% 83.16% 4ms 0.82% _XConnectXCB 4ms 0.82% 83.98% 4ms 0.82% __GI___libc_read 4ms 0.82% 84.80% 4ms 0.82% __mmap64 0 0% 84.80% 4ms 0.82% _dl_map_segments (inline) 0 0% 84.80% 4ms 0.82% mca_base_framework_components_open 0 0% 84.80% 4ms 0.82% mca_topo_base_dist_graph_neighbors_count 0 0% 84.80% 4ms 0.82% ompi_mpi_finalize 0 0% 84.80% 4ms 0.82% xcb_connect_to_display_with_auth_info 0 0% 84.80% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 3ms 0.62% 85.42% 3ms 0.62% TimeStepper::CalculateNextTime 0 0% 85.42% 3ms 0.62% TimeStepper::TimeStepper 0 0% 85.42% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 85.42% 3ms 0.62% __GI_exit 0 0% 85.42% 3ms 0.62% __cxa_finalize 0 0% 85.42% 3ms 0.62% __posix_memalign 0 0% 85.42% 3ms 0.62% __run_exit_handlers 0 0% 85.42% 3ms 0.62% _dl_call_fini 0 0% 85.42% 3ms 0.62% _dl_fini 0 0% 85.42% 3ms 0.62% _dl_map_object_deps 2ms 0.41% 85.83% 3ms 0.62% _int_malloc 0 0% 85.83% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 3ms 0.62% 86.45% 3ms 0.62% exp_inline (inline) 0 0% 86.45% 3ms 0.62% hwloc_alloc_setup_object 0 0% 86.45% 3ms 0.62% mca_base_component_var_register 0 0% 86.45% 3ms 0.62% mca_base_var_group_register 0 0% 86.45% 3ms 0.62% mca_base_var_register 0 0% 86.45% 3ms 0.62% openaux 3ms 0.62% 87.06% 3ms 0.62% std::_Rb_tree_increment 3ms 0.62% 87.68% 3ms 0.62% strcmp