File: Test3dBidomainProblemForEfficiencyWithFasterOdes Type: cpu Showing nodes accounting for 3689ms, 86.58% of 4261ms total Dropped 405 nodes (cum <= 21.30ms) flat flat% sum% cum cum% 0 0% 0% 4252ms 99.79% __libc_start_call_main 0 0% 0% 4252ms 99.79% __libc_start_main_impl 0 0% 0% 4252ms 99.79% _start 0 0% 0% 4249ms 99.72% main 0 0% 0% 4205ms 98.69% Test3dBidomainProblemForEfficiencyWithFasterOdes::TestBidomain3d 1ms 0.023% 0.023% 4197ms 98.50% AbstractCardiacProblem::Solve 1ms 0.023% 0.047% 4182ms 98.15% AbstractDynamicLinearPdeSolver::Solve 34ms 0.8% 0.84% 2092ms 49.10% AbstractCardiacTissue::SolveCellSystems 0 0% 0.84% 1665ms 39.08% LinearSystem::Solve 0 0% 0.84% 1624ms 38.11% KSPSolve 3ms 0.07% 0.92% 1624ms 38.11% KSPSolve_Private 0 0% 0.92% 1585ms 37.20% KSPSolve_CG 42ms 0.99% 1.90% 1391ms 32.64% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 436ms 10.23% 12.13% 1225ms 28.75% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 4ms 0.094% 12.23% 948ms 22.25% PCApply 0 0% 12.23% 932ms 21.87% PCApply_BJacobi_Singleblock 0 0% 12.23% 775ms 18.19% KSPSolve_PREONLY (partial-inline) 1ms 0.023% 12.25% 730ms 17.13% PCApply_ICC 1ms 0.023% 12.27% 729ms 17.11% MatSolve 1ms 0.023% 12.30% 727ms 17.06% KSP_PCApply.lto_priv.7 714ms 16.76% 29.05% 719ms 16.87% MatSolve_SeqSBAIJ_1_NaturalOrdering 350ms 8.21% 37.27% 569ms 13.35% CardiacNewtonSolver::Solve 324ms 7.60% 44.87% 556ms 13.05% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 3ms 0.07% 44.94% 554ms 13.00% MatMult 15ms 0.35% 45.29% 544ms 12.77% MatMult_SeqAIJ (partial-inline) 519ms 12.18% 57.47% 543ms 12.74% MatMult_SeqAIJ_Inode (inline) 97ms 2.28% 59.75% 371ms 8.71% BidomainSolver::SetupLinearSystem 0 0% 59.75% 302ms 7.09% KSPConvergedDefault 0 0% 59.75% 301ms 7.06% KSP_PCApply (partial-inline) 30ms 0.7% 60.46% 223ms 5.23% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 66ms 1.55% 62.00% 193ms 4.53% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::RegenerateTables 23ms 0.54% 62.54% 175ms 4.11% __pow 167ms 3.92% 66.46% 173ms 4.06% __ieee754_log_fma 16ms 0.38% 66.84% 150ms 3.52% __ieee754_pow_fma 2ms 0.047% 66.89% 128ms 3.00% MatNullSpaceRemove 126ms 2.96% 69.84% 126ms 2.96% ddot_ 48ms 1.13% 70.97% 120ms 2.82% __GI___exp 91ms 2.14% 73.10% 117ms 2.75% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 20ms 0.47% 73.57% 97ms 2.28% MPI_Wtime 62ms 1.46% 75.03% 95ms 2.23% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 92ms 2.16% 77.19% 94ms 2.21% exp_inline (inline) 2ms 0.047% 77.24% 86ms 2.02% VecNorm 0 0% 77.24% 85ms 1.99% VecDuplicate 0 0% 77.24% 77ms 1.81% VecTDot 1ms 0.023% 77.26% 77ms 1.81% __GI___clock_gettime 76ms 1.78% 79.04% 76ms 1.78% [[vdso]] 0 0% 79.04% 75ms 1.76% VecMDot 5ms 0.12% 79.16% 75ms 1.76% VecMXDot_Private 1ms 0.023% 79.18% 72ms 1.69% VecNorm_Seq 11ms 0.26% 79.44% 71ms 1.67% PetscLogEventBeginDefault 0 0% 79.44% 68ms 1.60% VecTDot_Seq 0 0% 79.44% 68ms 1.60% VecXDot_Seq_Private.constprop.0 40ms 0.94% 80.38% 59ms 1.38% __ieee754_exp_fma 54ms 1.27% 81.65% 54ms 1.27% [libchaste_heart.so] 10ms 0.23% 81.88% 52ms 1.22% PetscLogEventEndDefault 2ms 0.047% 81.93% 51ms 1.20% VecMAXPY 49ms 1.15% 83.08% 49ms 1.15% VecMDot_Seq 3ms 0.07% 83.15% 44ms 1.03% VecDestroy 1ms 0.023% 83.17% 43ms 1.01% VecDuplicate_Seq 0 0% 83.17% 42ms 0.99% AbstractBidomainSolver::FinaliseLinearSystem 3ms 0.07% 83.24% 42ms 0.99% VecDuplicate_MPI 15ms 0.35% 83.60% 41ms 0.96% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 83.60% 40ms 0.94% CxxTest::RealWorldDescription::setUp 0 0% 83.60% 40ms 0.94% PetscSetup::setUpWorld 0 0% 83.60% 40ms 0.94% PetscSetupUtils::CommonSetup 0 0% 83.60% 40ms 0.94% VecCreate 0 0% 83.60% 39ms 0.92% PMPI_Init_thread 0 0% 83.60% 39ms 0.92% PetscInitialize 2ms 0.047% 83.64% 39ms 0.92% PetscMallocA 0 0% 83.64% 39ms 0.92% PetscSetupUtils::InitialisePetsc 0 0% 83.64% 39ms 0.92% ompi_mpi_init 2ms 0.047% 83.69% 37ms 0.87% PetscMallocAlign 37ms 0.87% 84.56% 37ms 0.87% log_inline (inline) 3ms 0.07% 84.63% 34ms 0.8% 15ms 0.35% 84.98% 34ms 0.8% AbstractCardiacCell::SetVoltage 0 0% 84.98% 34ms 0.8% VecNorm_MPI 0 0% 84.98% 34ms 0.8% VecNorm_MPI_Default.constprop.0 30ms 0.7% 85.68% 30ms 0.7% DistributedVector::Iterator::operator!= 4ms 0.094% 85.78% 30ms 0.7% VecCopy 26ms 0.61% 86.39% 26ms 0.61% VecMAXPY_Seq 1ms 0.023% 86.41% 25ms 0.59% VecAXPY 2ms 0.047% 86.46% 24ms 0.56% __posix_memalign 0 0% 86.46% 24ms 0.56% orte_init 0 0% 86.46% 23ms 0.54% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 86.46% 22ms 0.52% VecAYPX 5ms 0.12% 86.58% 22ms 0.52% __GI___libc_malloc