File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 3705ms, 87.63% of 4228ms total Dropped 373 nodes (cum <= 21.14ms) flat flat% sum% cum cum% 0 0% 0% 4217ms 99.74% __libc_start_call_main 0 0% 0% 4217ms 99.74% __libc_start_main_impl 0 0% 0% 4217ms 99.74% _start 0 0% 0% 4214ms 99.67% main 0 0% 0% 4172ms 98.68% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 1ms 0.024% 0.024% 4165ms 98.51% AbstractCardiacProblem::Solve 0 0% 0.024% 4143ms 97.99% AbstractDynamicLinearPdeSolver::Solve 34ms 0.8% 0.83% 2264ms 53.55% AbstractCardiacTissue::SolveCellSystems 2ms 0.047% 0.88% 1498ms 35.43% LinearSystem::Solve 2ms 0.047% 0.92% 1444ms 34.15% KSPSolve 3ms 0.071% 0.99% 1444ms 34.15% KSPSolve_Private 4ms 0.095% 1.09% 1409ms 33.33% KSPSolve_SYMMLQ 36ms 0.85% 1.94% 1281ms 30.30% AbstractCardiacCell::ComputeExceptVoltage 30ms 0.71% 2.65% 1108ms 26.21% AbstractOneStepIvpOdeSolver::InternalSolve 70ms 1.66% 4.30% 932ms 22.04% EulerIvpOdeSolver::CalculateNextYValue 237ms 5.61% 9.91% 858ms 20.29% CellLuoRudy1991FromCellML::EvaluateYDerivatives 4ms 0.095% 10.00% 825ms 19.51% PCApply 0 0% 10.00% 812ms 19.21% PCApply_BJacobi_Singleblock 281ms 6.65% 16.65% 754ms 17.83% CellLuoRudy1991FromCellML::GetIIonic 368ms 8.70% 25.35% 751ms 17.76% __GI___exp 0 0% 25.35% 670ms 15.85% KSPSolve_PREONLY (partial-inline) 0 0% 25.35% 624ms 14.76% KSP_PCApply.lto_priv.18 2ms 0.047% 25.40% 617ms 14.59% MatSolve 0 0% 25.40% 617ms 14.59% PCApply_ICC 605ms 14.31% 39.71% 611ms 14.45% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 6ms 0.14% 39.85% 431ms 10.19% MatMult 11ms 0.26% 40.11% 416ms 9.84% MatMult_SeqAIJ (partial-inline) 405ms 9.58% 49.69% 416ms 9.84% MatMult_SeqAIJ_Inode (inline) 315ms 7.45% 57.14% 363ms 8.59% __ieee754_exp_fma 104ms 2.46% 59.60% 322ms 7.62% BidomainSolver::SetupLinearSystem 1ms 0.024% 59.63% 300ms 7.10% KSPConvergedDefault 0 0% 59.63% 284ms 6.72% KSP_PCApply (partial-inline) 29ms 0.69% 60.31% 259ms 6.13% __pow 22ms 0.52% 60.83% 228ms 5.39% __ieee754_pow_fma 0 0% 60.83% 132ms 3.12% MatNullSpaceRemove 114ms 2.70% 63.53% 114ms 2.70% log_inline (inline) 77ms 1.82% 65.35% 98ms 2.32% CellLuoRudy1991FromCellML::VerifyStateVariables 22ms 0.52% 65.87% 96ms 2.27% MPI_Wtime 0 0% 65.87% 96ms 2.27% VecDuplicate 84ms 1.99% 67.86% 85ms 2.01% exp_inline (inline) 0 0% 67.86% 80ms 1.89% VecMDot 2ms 0.047% 67.90% 80ms 1.89% VecMXDot_Private 33ms 0.78% 68.68% 79ms 1.87% TimeStepper::TimeStepper 2ms 0.047% 68.73% 74ms 1.75% __GI___clock_gettime 73ms 1.73% 70.46% 73ms 1.73% ddot_ 72ms 1.70% 72.16% 72ms 1.70% [[vdso]] 14ms 0.33% 72.49% 70ms 1.66% PetscLogEventEndDefault 11ms 0.26% 72.75% 67ms 1.58% PetscLogEventBeginDefault 2ms 0.047% 72.80% 61ms 1.44% VecDestroy 1ms 0.024% 72.82% 57ms 1.35% VecDot 3ms 0.071% 72.89% 57ms 1.35% VecDuplicate_MPI 8ms 0.19% 73.08% 55ms 1.30% VecCopy 54ms 1.28% 74.36% 54ms 1.28% TimeStepper::CalculateNextTime 0 0% 74.36% 54ms 1.28% VecNorm 53ms 1.25% 75.61% 53ms 1.25% [libchaste_heart.so] 11ms 0.26% 75.88% 52ms 1.23% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 75.88% 52ms 1.23% AbstractBidomainSolver::FinaliseLinearSystem 1ms 0.024% 75.90% 52ms 1.23% VecMAXPY 50ms 1.18% 77.08% 51ms 1.21% VecMDot_Seq 50ms 1.18% 78.26% 50ms 1.18% AbstractParameterisedSystem::SetAnyVariable 0 0% 78.26% 49ms 1.16% VecDot_Seq 1ms 0.024% 78.29% 49ms 1.16% VecXDot_Seq_Private.constprop.0 0 0% 78.29% 46ms 1.09% VecNorm_Seq 43ms 1.02% 79.30% 44ms 1.04% __ieee754_log_fma 3ms 0.071% 79.38% 42ms 0.99% VecAXPY 32ms 0.76% 80.13% 42ms 0.99% top12 (inline) 41ms 0.97% 81.10% 41ms 0.97% __memcpy_avx_unaligned_erms 39ms 0.92% 82.02% 39ms 0.92% DistributedVector::Iterator::operator!= 1ms 0.024% 82.05% 39ms 0.92% PetscMallocA 0 0% 82.05% 39ms 0.92% VecDuplicate_Seq 1ms 0.024% 82.07% 38ms 0.9% PetscMallocAlign 0 0% 82.07% 38ms 0.9% VecCreate 0 0% 82.07% 37ms 0.88% CxxTest::RealWorldDescription::setUp 0 0% 82.07% 37ms 0.88% PMPI_Init_thread 0 0% 82.07% 37ms 0.88% PetscInitialize 0 0% 82.07% 37ms 0.88% PetscSetup::setUpWorld 0 0% 82.07% 37ms 0.88% PetscSetupUtils::CommonSetup 0 0% 82.07% 37ms 0.88% PetscSetupUtils::InitialisePetsc 0 0% 82.07% 37ms 0.88% ompi_mpi_init 23ms 0.54% 82.62% 34ms 0.8% AbstractOneStepIvpOdeSolver::Solve 4ms 0.095% 82.71% 33ms 0.78% 0 0% 82.71% 33ms 0.78% PetscMemcpy (inline) 18ms 0.43% 83.14% 31ms 0.73% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 9ms 0.21% 83.35% 30ms 0.71% AbstractCardiacCell::SetVoltage 2ms 0.047% 83.40% 30ms 0.71% VecCreate_MPI_Private 28ms 0.66% 84.06% 30ms 0.71% VecMAXPY_Seq 0 0% 84.06% 28ms 0.66% VecNorm_MPI 0 0% 84.06% 28ms 0.66% VecNorm_MPI_Default.constprop.0 1ms 0.024% 84.08% 27ms 0.64% PetscHeaderDestroy_Private 0 0% 84.08% 27ms 0.64% VecCopy_Seq (partial-inline) 26ms 0.61% 84.70% 26ms 0.61% ReplicatableVector::operator[] 12ms 0.28% 84.98% 26ms 0.61% __GI___libc_malloc 3ms 0.071% 85.05% 26ms 0.61% __posix_memalign 22ms 0.52% 85.57% 25ms 0.59% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 25ms 0.59% 86.16% 25ms 0.59% asuint64 (inline) 2ms 0.047% 86.21% 24ms 0.57% VecAXPY_Seq 0 0% 86.21% 24ms 0.57% orte_init 23ms 0.54% 86.75% 23ms 0.54% AbstractParameterisedSystem::GetAnyVariable 11ms 0.26% 87.02% 23ms 0.54% TimeStepper::AdvanceOneTimeStep 1ms 0.024% 87.04% 23ms 0.54% VecSetType 3ms 0.071% 87.11% 22ms 0.52% PetscOptionsFindPair 22ms 0.52% 87.63% 22ms 0.52% [libm.so.6]