File: Test2dVertexBasedSimulationWithFreeBoundary Type: cpu Showing nodes accounting for 48161ms, 83.41% of 57738ms total Dropped 1121 nodes (cum <= 288.69ms) flat flat% sum% cum cum% 0 0% 0% 54710ms 94.76% __libc_start_call_main 0 0% 0% 54710ms 94.76% __libc_start_main_impl 0 0% 0% 54710ms 94.76% _start 0 0% 0% 54693ms 94.73% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 54693ms 94.73% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 54693ms 94.73% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 54693ms 94.73% main 0 0% 0% 54654ms 94.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 54654ms 94.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 54654ms 94.66% Test2DVertexSimulationWithFreeBoundary::Test2DFreeBoundaryVertexSimulationForProfiling 0 0% 0% 53006ms 91.80% AbstractCellBasedSimulation::Solve 0 0% 0% 31195ms 54.03% AbstractCellPopulation::WriteResultsToFiles 1ms 0.0017% 0.0017% 23620ms 40.91% VertexBasedCellPopulation::WriteVtkResultsToFile 10ms 0.017% 0.019% 23467ms 40.64% VertexBasedCellPopulation::WriteCellVtkResultsToFile 1ms 0.0017% 0.021% 20709ms 35.87% VertexMeshWriter::WriteVtkUsingMesh 29ms 0.05% 0.071% 16017ms 27.74% VertexMeshWriter::MakeVtkMesh 4ms 0.0069% 0.078% 13971ms 24.20% OffLatticeSimulation::UpdateCellLocationsAndTopology 2ms 0.0035% 0.081% 13348ms 23.12% ForwardEulerNumericalMethod::UpdateAllNodePositions 26ms 0.045% 0.13% 13019ms 22.55% AbstractNumericalMethod::ComputeForcesIncludingDamping 4ms 0.0069% 0.13% 11443ms 19.82% vtkPolygon::New 27ms 0.047% 0.18% 11431ms 19.80% vtkPolygon::vtkPolygon 134ms 0.23% 0.41% 8951ms 15.50% FarhadifarForce::AddForceContribution 53ms 0.092% 0.5% 8082ms 14.00% vtkCell::vtkCell 30ms 0.052% 0.56% 7009ms 12.14% vtkPoints::New 1ms 0.0017% 0.56% 6810ms 11.79% AbstractCellBasedSimulation::UpdateCellPopulation 121ms 0.21% 0.77% 6685ms 11.58% vtkPoints::vtkPoints 1ms 0.0017% 0.77% 6003ms 10.40% VertexBasedCellPopulation::Update 2ms 0.0035% 0.77% 5996ms 10.38% MutableVertexMesh::ReMesh 57ms 0.099% 0.87% 5657ms 9.80% CellPropertyCollection::GetPropertiesType (inline) 3ms 0.0052% 0.88% 5574ms 9.65% vtkQuad::New 21ms 0.036% 0.91% 5549ms 9.61% vtkQuad::vtkQuad 341ms 0.59% 1.50% 5533ms 9.58% operator new 1450ms 2.51% 4.01% 5302ms 9.18% __GI___libc_malloc 6ms 0.01% 4.03% 5062ms 8.77% vtkLine::New 73ms 0.13% 4.15% 4987ms 8.64% vtkLine::vtkLine 9ms 0.016% 4.17% 4901ms 8.49% vtkTriangle::New 38ms 0.066% 4.23% 4856ms 8.41% vtkTriangle::vtkTriangle 28ms 0.048% 4.28% 4677ms 8.10% AbstractCellProperty::IsSubType (inline) 1222ms 2.12% 6.40% 4648ms 8.05% __dynamic_cast 0 0% 6.40% 4599ms 7.97% vtkStreamingDemandDrivenPipeline::Update 0 0% 6.40% 4599ms 7.97% vtkXMLWriterBase::Write 0 0% 6.40% 4582ms 7.94% vtkDemandDrivenPipeline::ProcessRequest 0 0% 6.40% 4561ms 7.90% vtkStreamingDemandDrivenPipeline::ProcessRequest 0 0% 6.40% 4554ms 7.89% vtkExecutive::CallAlgorithm 0 0% 6.40% 4549ms 7.88% vtkDemandDrivenPipeline::ExecuteData 0 0% 6.40% 4541ms 7.86% vtkCompositeDataPipeline::ExecuteData 4ms 0.0069% 6.40% 4539ms 7.86% vtkXMLUnstructuredDataWriter::ProcessRequest 144ms 0.25% 6.65% 4524ms 7.84% boost::numeric::ublas::c_vector::c_vector (partial-inline) 246ms 0.43% 7.08% 4257ms 7.37% vtkPoints::SetDataType 23ms 0.04% 7.12% 4042ms 7.00% vtkPolygon::~vtkPolygon 93ms 0.16% 7.28% 4031ms 6.98% boost::numeric::ublas::vector_assign (inline) 196ms 0.34% 7.62% 3910ms 6.77% VertexBasedCellPopulation::GetDampingConstant 0 0% 7.62% 3820ms 6.62% vtkXMLUnstructuredDataWriter::WriteAPiece 0 0% 7.62% 3820ms 6.62% vtkXMLUnstructuredGridWriter::WriteAppendedPieceData 290ms 0.5% 8.12% 3599ms 6.23% std::ostream::_M_insert 4ms 0.0069% 8.13% 3571ms 6.18% std::ostream::operator<< (inline) 1162ms 2.01% 10.14% 3395ms 5.88% __GI___libc_free 2ms 0.0035% 10.15% 3213ms 5.56% vtkXMLWriter::WriteBinaryData 1ms 0.0017% 10.15% 3180ms 5.51% vtkXMLWriter::WriteBinaryDataInternal 2ms 0.0035% 10.15% 3175ms 5.50% vtkXMLWriter::WriteBinaryDataBlock 115ms 0.2% 10.35% 3160ms 5.47% vtkCell::~vtkCell 30ms 0.052% 10.40% 3147ms 5.45% Cell::GetMutationState 4ms 0.0069% 10.41% 3092ms 5.36% tbb::detail::r1::parallel_pipeline 86ms 0.15% 10.56% 3092ms 5.36% vtkBase64OutputStream::Write 759ms 1.31% 11.87% 3091ms 5.35% boost::numeric::ublas::indexing_vector_assign 7ms 0.012% 11.88% 3081ms 5.34% MutableVertexMesh::RemoveDeletedNodesAndElements 265ms 0.46% 12.34% 3006ms 5.21% vtkBase64OutputStream::EncodeTriplet 0 0% 12.34% 2993ms 5.18% clone3 0 0% 12.34% 2993ms 5.18% start_thread 4ms 0.0069% 12.35% 2978ms 5.16% tbb::detail::r1::reset 14ms 0.024% 12.37% 2968ms 5.14% NodeLocationWriter::VisitAnyPopulation 244ms 0.42% 12.80% 2951ms 5.11% std::map::operator[] (partial-inline) 1195ms 2.07% 14.87% 2939ms 5.09% tbb::detail::r1::wait_bounded_queue_monitor 1683ms 2.91% 17.78% 2898ms 5.02% _int_malloc 180ms 0.31% 18.09% 2800ms 4.85% VertexMesh::GetNextEdgeGradientOfElementAtNode 2793ms 4.84% 22.93% 2793ms 4.84% __strcmp_avx2 413ms 0.72% 23.65% 2604ms 4.51% vtkAOSDataArrayTemplate::vtkAOSDataArrayTemplate 187ms 0.32% 23.97% 2575ms 4.46% std::num_put::_M_insert_float 1ms 0.0017% 23.97% 2491ms 4.31% vtkXMLUnstructuredDataWriter::WriteAppendedPieceData 806ms 1.40% 25.37% 2475ms 4.29% std::ostream::write 1060ms 1.84% 27.20% 2425ms 4.20% std::_Rb_tree::_M_lower_bound (inline) 1177ms 2.04% 29.24% 2406ms 4.17% __cxxabiv1::__si_class_type_info::__do_dyncast 158ms 0.27% 29.52% 2399ms 4.15% VertexMesh::GetVectorFromAtoB 10ms 0.017% 29.53% 2281ms 3.95% AbstractCellPopulation::AcceptCellWritersAcrossPopulation 1886ms 3.27% 32.80% 2227ms 3.86% _int_free 12ms 0.021% 32.82% 2198ms 3.81% MutableVertexMesh::RemoveDeletedNodes 10ms 0.017% 32.84% 2119ms 3.67% EdgeHelper::RemoveDeletedEdges 59ms 0.1% 32.94% 2075ms 3.59% std::__new_allocator::allocate (inline) 518ms 0.9% 33.84% 2058ms 3.56% AbstractMesh::GetDistanceBetweenNodes (partial-inline) 27ms 0.047% 33.88% 2052ms 3.55% std::__cxx11::collate::do_transform 55ms 0.095% 33.98% 2022ms 3.50% vtkPoints::~vtkPoints 83ms 0.14% 34.12% 2018ms 3.50% AbstractCellPopulation::GetCellUsingLocationIndex 13ms 0.023% 34.15% 2002ms 3.47% EdgeHelper::UpdateEdgesMapKey 21ms 0.036% 34.18% 1994ms 3.45% Cell::GetCellProliferativeType 1ms 0.0017% 34.18% 1972ms 3.42% ___vsnprintf 1ms 0.0017% 34.19% 1972ms 3.42% __vsnprintf_internal (inline) 0 0% 34.19% 1962ms 3.40% std::allocator_traits::allocate (inline) 197ms 0.34% 34.53% 1934ms 3.35% __printf_buffer 11ms 0.019% 34.55% 1922ms 3.33% VertexBasedCellPopulation::AcceptCellWriter 88ms 0.15% 34.70% 1865ms 3.23% MutableElement::ResetIndex 50ms 0.087% 34.78% 1819ms 3.15% vtkIdList::AllocateInternal 26ms 0.045% 34.83% 1811ms 3.14% vtkQuad::~vtkQuad 0 0% 34.83% 1803ms 3.12% std::_Rb_tree::lower_bound (inline) 0 0% 34.83% 1803ms 3.12% std::map::lower_bound (inline) 17ms 0.029% 34.86% 1762ms 3.05% vtkTriangle::~vtkTriangle 1719ms 2.98% 37.84% 1719ms 2.98% __GI_sched_yield 8ms 0.014% 37.85% 1679ms 2.91% CellPopulationElementWriter::Visit 18ms 0.031% 37.88% 1664ms 2.88% vtkLine::GetParametricCenter 0 0% 37.88% 1644ms 2.85% VoronoiVertexMeshGenerator::GenerateVoronoiMesh 0 0% 37.88% 1644ms 2.85% VoronoiVertexMeshGenerator::VoronoiVertexMeshGenerator 871ms 1.51% 39.39% 1636ms 2.83% VoronoiVertexMeshGenerator::CreateVoronoiTessellation 8ms 0.014% 39.40% 1614ms 2.80% __printf_fp_spec (inline) 59ms 0.1% 39.51% 1610ms 2.79% vtkFloatArray::New 46ms 0.08% 39.59% 1606ms 2.78% __printf_fp_l_buffer 20ms 0.035% 39.62% 1589ms 2.75% vtkTypeFloat64Array::~vtkTypeFloat64Array 1580ms 2.74% 42.36% 1580ms 2.74% boost::numeric::ublas::c_vector::operator() 0 0% 42.36% 1557ms 2.70% std::_Rb_tree::_M_create_node (inline) 52ms 0.09% 42.45% 1518ms 2.63% vtkDataArray::CreateDataArray 616ms 1.07% 43.51% 1512ms 2.62% __printf_fp_buffer_1 138ms 0.24% 43.75% 1374ms 2.38% AbstractMesh::GetVectorFromAtoB 1ms 0.0017% 43.75% 1374ms 2.38% vtkXMLWriter::WritePointsAppendedData 43ms 0.074% 43.83% 1366ms 2.37% MutableVertexMesh::CheckForIntersections 19ms 0.033% 43.86% 1358ms 2.35% vtkFloatArray::vtkFloatArray 63ms 0.11% 43.97% 1355ms 2.35% vtkTypeFloat64Array::New 551ms 0.95% 44.93% 1335ms 2.31% std::basic_filebuf::xsputn 0 0% 44.93% 1327ms 2.30% std::_Rb_tree::_M_get_node (inline) 5ms 0.0087% 44.93% 1306ms 2.26% LegacyCellProliferativeTypesWriter::VisitCell 1ms 0.0017% 44.94% 1302ms 2.26% vtkXMLUnstructuredDataWriter::WriteCellsAppendedDataWorker 25ms 0.043% 44.98% 1283ms 2.22% vtkDoubleArray::vtkDoubleArray 76ms 0.13% 45.11% 1214ms 2.10% vtkFloatArray::~vtkFloatArray 18ms 0.031% 45.14% 1210ms 2.10% LegacyCellProliferativeTypesWriter::GetCellDataForVtkOutput 312ms 0.54% 45.68% 1193ms 2.07% std::_Rb_tree::_M_erase 282ms 0.49% 46.17% 1186ms 2.05% vtkObject::vtkObject 9ms 0.016% 46.19% 1171ms 2.03% Cell::GetCellData 28ms 0.048% 46.23% 1165ms 2.02% AbstractCellProperty::IsType (inline) 57ms 0.099% 46.33% 1163ms 2.01% std::__new_allocator::deallocate (inline) 1158ms 2.01% 48.34% 1158ms 2.01% boost::numeric::ublas::same_impl_ex 0 0% 48.34% 1155ms 2.00% std::allocator_traits::deallocate (inline) 15ms 0.026% 48.37% 1134ms 1.96% std::_Rb_tree::erase 0 0% 48.37% 1129ms 1.96% std::_Rb_tree::_M_drop_node (inline) 34ms 0.059% 48.42% 1129ms 1.96% vtkTypeFloat64Array::vtkTypeFloat64Array 40ms 0.069% 48.49% 1113ms 1.93% CellPropertyCollection::HasProperty 1108ms 1.92% 50.41% 1108ms 1.92% __memcpy_avx_unaligned_erms 0 0% 50.41% 1097ms 1.90% Cell::HasCellProperty (inline) 1ms 0.0017% 50.41% 1094ms 1.89% vtkXMLWriter::WriteCellDataAppendedData 82ms 0.14% 50.56% 1088ms 1.88% boost::numeric::ublas::c_vector::operator= (inline) 0 0% 50.56% 1071ms 1.85% std::_Rb_tree::_Alloc_node::operator() (inline) 1070ms 1.85% 52.41% 1070ms 1.85% std::_Rb_tree::_S_right (inline) 92ms 0.16% 52.57% 1056ms 1.83% std::vector::_M_default_append (partial-inline) 0 0% 52.57% 1030ms 1.78% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 52.57% 1030ms 1.78% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 0 0% 52.57% 1013ms 1.75% AbstractTargetAreaModifier::UpdateTargetAreas 3ms 0.0052% 52.57% 1007ms 1.74% TargetAreaLinearGrowthModifier::UpdateTargetAreaOfCell 0 0% 52.57% 978ms 1.69% boost::numeric::ublas::c_vector::operator-= (inline) 0 0% 52.57% 947ms 1.64% std::_Rb_tree::_M_put_node (inline) 6ms 0.01% 52.58% 935ms 1.62% std::_Rb_tree::_M_insert_unique (inline) 0 0% 52.58% 935ms 1.62% std::set::insert (inline) 403ms 0.7% 53.28% 913ms 1.58% vtkTypeFloat64Array::PrintSelf 123ms 0.21% 53.50% 897ms 1.55% std::_Rb_tree::~_Rb_tree (inline) 16ms 0.028% 53.52% 887ms 1.54% std::_Rb_tree::_M_emplace_hint_unique 0 0% 53.52% 877ms 1.52% tcache_get (inline) 877ms 1.52% 55.04% 877ms 1.52% tcache_get_n (inline) 7ms 0.012% 55.05% 867ms 1.50% AbstractCellPopulation::Iterator::operator++ (inline) 263ms 0.46% 55.51% 852ms 1.48% vtkObject::Modified 27ms 0.047% 55.56% 850ms 1.47% AbstractCellPopulation::Iterator::IsRealCell (inline) 185ms 0.32% 55.88% 849ms 1.47% VertexMesh::GetAreaGradientOfElementAtNode 38ms 0.066% 55.94% 840ms 1.45% std::__copy_move::__copy_m (inline) 0 0% 55.94% 840ms 1.45% std::__copy_move_a (inline) 0 0% 55.94% 840ms 1.45% std::__copy_move_a1 (inline) 0 0% 55.94% 840ms 1.45% std::__copy_move_a2 (inline) 0 0% 55.94% 840ms 1.45% std::copy (inline) 187ms 0.32% 56.27% 836ms 1.45% AbstractCellProperty::IsSame 537ms 0.93% 57.20% 830ms 1.44% vtkObjectBase::UnRegisterInternal 126ms 0.22% 57.41% 806ms 1.40% boost::numeric::ublas::vector_binary::size (inline) 93ms 0.16% 57.58% 805ms 1.39% std::_Rb_tree::_M_insert_ (inline) 97ms 0.17% 57.74% 804ms 1.39% vtkAOSDataArrayTemplate::DataElementChanged 566ms 0.98% 58.72% 786ms 1.36% std::basic_streambuf::xsputn 67ms 0.12% 58.84% 785ms 1.36% vtkDoubleArray::~vtkDoubleArray 75ms 0.13% 58.97% 779ms 1.35% std::_Rb_tree::_Rb_tree (partial-inline) 0 0% 58.97% 761ms 1.32% std::set::~set (inline) 17ms 0.029% 59.00% 736ms 1.27% VertexBasedCellPopulation::IsCellAssociatedWithADeletedLocation 58ms 0.1% 59.10% 711ms 1.23% VertexMesh::GetVolumeOfElement 0 0% 59.10% 705ms 1.22% boost::numeric::ublas::c_vector::assign (inline) 99ms 0.17% 59.27% 702ms 1.22% std::_Rb_tree_const_iterator::operator++ (inline) 150ms 0.26% 59.53% 696ms 1.21% AbstractElement::GetNodeLocation 93ms 0.16% 59.69% 691ms 1.20% std::_Rb_tree::find (inline) 0 0% 59.69% 685ms 1.19% boost::numeric::ublas::norm_2 (inline) 361ms 0.63% 60.32% 684ms 1.18% boost::numeric::ublas::vector_norm_2::apply 89ms 0.15% 60.47% 676ms 1.17% VertexMesh::ElementIncludesPoint 292ms 0.51% 60.98% 670ms 1.16% std::__ostream_insert 404ms 0.7% 61.68% 668ms 1.16% std::_Rb_tree::equal_range (inline) 75ms 0.13% 61.81% 667ms 1.16% std::_Rb_tree::_M_copy (inline) 601ms 1.04% 62.85% 658ms 1.14% malloc_consolidate 122ms 0.21% 63.06% 649ms 1.12% std::type_info::operator== (inline) 253ms 0.44% 63.50% 643ms 1.11% hack_digit 42ms 0.073% 63.57% 631ms 1.09% boost::numeric::ublas::vector_reference::operator() (inline) 6ms 0.01% 63.58% 625ms 1.08% std::set::set (inline) 110ms 0.19% 63.77% 598ms 1.04% boost::numeric::ublas::c_vector::operator[] (inline) 11ms 0.019% 63.79% 589ms 1.02% AbstractCellPopulation::GetLocationIndexUsingCell 18ms 0.031% 63.82% 588ms 1.02% Node::RemoveElement 588ms 1.02% 64.84% 588ms 1.02% tcache_put (inline) 586ms 1.01% 65.85% 586ms 1.01% std::_Rb_tree_increment 123ms 0.21% 66.07% 584ms 1.01% std::_Rb_tree::_M_clone_node (inline) 22ms 0.038% 66.11% 582ms 1.01% VertexBasedCellPopulation::GetElementCorrespondingToCell (inline) 1ms 0.0017% 66.11% 578ms 1.00% vtkIdList::Allocate 12ms 0.021% 66.13% 576ms 1% std::set::erase (inline) 48ms 0.083% 66.21% 571ms 0.99% std::less::operator() (inline) 0 0% 66.21% 570ms 0.99% std::_Vector_base::_M_allocate (inline) 0 0% 66.21% 566ms 0.98% boost::numeric::ublas::vector_binary::operator() (inline) 62ms 0.11% 66.32% 553ms 0.96% vtkDataArray::vtkDataArray 124ms 0.21% 66.53% 551ms 0.95% FarhadifarForce::GetLineTensionParameter 108ms 0.19% 66.72% 548ms 0.95% std::num_put::_M_insert_int 544ms 0.94% 67.66% 544ms 0.94% vtkTimeStamp::Modified 25ms 0.043% 67.71% 543ms 0.94% vtkIdList::New 541ms 0.94% 68.64% 541ms 0.94% Node::rGetLocation 1ms 0.0017% 68.64% 525ms 0.91% std::__basic_file::xsputn_2 435ms 0.75% 69.40% 523ms 0.91% std::operator< (inline) 521ms 0.9% 70.30% 522ms 0.9% __GI___writev 509ms 0.88% 71.18% 509ms 0.88% std::ostream::sentry::sentry 2ms 0.0035% 71.19% 507ms 0.88% CellProliferativeTypesWriter::VisitCell 7ms 0.012% 71.20% 507ms 0.88% VertexMesh::GetSurfaceAreaOfElement 58ms 0.1% 71.30% 505ms 0.87% CellPropertyCollection::AddProperty 14ms 0.024% 71.32% 503ms 0.87% std::operator<< (partial-inline) 33ms 0.057% 71.38% 499ms 0.86% MutableVertexMesh::CheckForSwapsFromShortEdges 0 0% 71.38% 486ms 0.84% std::_Rb_tree::_Auto_node::_Auto_node (inline) 96ms 0.17% 71.55% 485ms 0.84% boost::detail::shared_count::~shared_count (inline) 0 0% 71.55% 485ms 0.84% boost::shared_ptr::~shared_ptr (inline) 483ms 0.84% 72.38% 483ms 0.84% [libvtkCommonCore-9.3.so.9.3] 117ms 0.2% 72.58% 479ms 0.83% vtkAbstractArray::vtkAbstractArray 7ms 0.012% 72.60% 475ms 0.82% AbstractCellBasedSimulation::DoCellBirth 456ms 0.79% 73.39% 463ms 0.8% vtkObjectBase::Delete 66ms 0.11% 73.50% 459ms 0.79% vtkSOADataArrayTemplate::FillTypedComponent 455ms 0.79% 74.29% 455ms 0.79% Node::GetIndex 28ms 0.048% 74.34% 454ms 0.79% std::_Rb_tree::_M_erase_aux (inline) 9ms 0.016% 74.35% 452ms 0.78% std::basic_filebuf::overflow 298ms 0.52% 74.87% 444ms 0.77% std::_Hashtable::clear 8ms 0.014% 74.88% 443ms 0.77% std::basic_filebuf::_M_convert_to_external 1ms 0.0017% 74.88% 434ms 0.75% std::__basic_file::xsputn 425ms 0.74% 75.62% 430ms 0.74% __GI___libc_write 75ms 0.13% 75.75% 423ms 0.73% vtkDataArray::~vtkDataArray 0 0% 75.75% 419ms 0.73% std::_Rb_tree::clear (inline) 120ms 0.21% 75.96% 416ms 0.72% boost::shared_ptr::shared_ptr (inline) 1ms 0.0017% 75.96% 415ms 0.72% boost::numeric::ublas::detail::expression_type_check (inline) 14ms 0.024% 75.98% 414ms 0.72% CellProliferativeTypesWriter::GetCellDataForVtkOutput 30ms 0.052% 76.04% 413ms 0.72% boost::numeric::ublas::detail::equals 405ms 0.7% 76.74% 406ms 0.7% vtkObject::~vtkObject 0 0% 76.74% 404ms 0.7% std::map::clear (inline) 51ms 0.088% 76.83% 400ms 0.69% vtkIdList::~vtkIdList 1ms 0.0017% 76.83% 398ms 0.69% vtkDataArray::ComputeRange 0 0% 76.83% 395ms 0.68% std::map::find (inline) 388ms 0.67% 77.50% 388ms 0.67% [libchaste_cell_based.so] 380ms 0.66% 78.16% 382ms 0.66% boost::detail::sp_counted_base::release 50ms 0.087% 78.24% 381ms 0.66% tbb::detail::r1::cancel_group_execution 0 0% 78.24% 379ms 0.66% CellPropertyCollection::~CellPropertyCollection (inline) 373ms 0.65% 78.89% 373ms 0.65% vtkObjectBase::~vtkObjectBase 0 0% 78.89% 363ms 0.63% boost::numeric::ublas::c_vector::assign_temporary (inline) 0 0% 78.89% 363ms 0.63% boost::numeric::ublas::c_vector::swap (inline) 34ms 0.059% 78.95% 363ms 0.63% std::swap_ranges (inline) 2ms 0.0035% 78.95% 359ms 0.62% vtk::detail::smp::vtkSMPToolsImplForTBB 355ms 0.61% 79.57% 355ms 0.61% std::_Rb_tree_insert_and_rebalance 352ms 0.61% 80.18% 352ms 0.61% [libchaste_mesh.so] 0 0% 80.18% 345ms 0.6% boost::numeric::ublas::norm_inf (inline) 123ms 0.21% 80.39% 345ms 0.6% boost::numeric::ublas::vector_norm_inf::apply (inline) 338ms 0.59% 80.98% 338ms 0.59% std::vector::size (inline) 83ms 0.14% 81.12% 334ms 0.58% MutableElement::GetNodeLocalIndex 0 0% 81.12% 329ms 0.57% AbstractCellBasedSimulation::DoCellRemoval (inline) 0 0% 81.12% 329ms 0.57% std::iter_swap (inline) 329ms 0.57% 81.69% 329ms 0.57% std::swap (inline) 9ms 0.016% 81.71% 326ms 0.56% MutableElement::RegisterWithEdges (inline) 322ms 0.56% 82.26% 322ms 0.56% vtkObjectBase::vtkObjectBase 2ms 0.0035% 82.27% 321ms 0.56% T2SwapCellKiller::CheckAndLabelCellsForApoptosisOrDeath 12ms 0.021% 82.29% 315ms 0.55% Edge::AddElement 1ms 0.0017% 82.29% 312ms 0.54% vtkXMLUnstructuredDataWriter::WriteHeader 68ms 0.12% 82.41% 306ms 0.53% Edge::GetMapIndex 297ms 0.51% 82.92% 297ms 0.51% [libstdc++.so.6.0.33] 283ms 0.49% 83.41% 296ms 0.51% boost::detail::shared_count::shared_count (inline) 0 0% 83.41% 295ms 0.51% std::set::count (inline) 1ms 0.0017% 83.41% 294ms 0.51% std::basic_filebuf::open