File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109026ms, 91.68% of 118926ms total Dropped 1139 nodes (cum <= 594.63ms) flat flat% sum% cum cum% 0 0% 0% 118909ms 100% __libc_start_call_main 0 0% 0% 118909ms 100% __libc_start_main_impl 0 0% 0% 118909ms 100% _start 0 0% 0% 118906ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118906ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118906ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118906ms 100% main 0 0% 0% 118870ms 100% AbstractConvergenceTester::Converge 0 0% 0% 118870ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118870ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118870ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118870ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118870ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0017% 0.0017% 117643ms 98.92% AbstractCardiacProblem::Solve 8ms 0.0067% 0.0084% 116847ms 98.25% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0025% 0.011% 65268ms 54.88% LinearSystem::Solve 2ms 0.0017% 0.013% 64734ms 54.43% KSPSolve 8ms 0.0067% 0.019% 64732ms 54.43% KSPSolve_Private 11ms 0.0092% 0.029% 64363ms 54.12% KSPSolve_SYMMLQ 209ms 0.18% 0.2% 42591ms 35.81% AbstractCardiacTissue::SolveCellSystems 4ms 0.0034% 0.21% 36416ms 30.62% PCApply 5ms 0.0042% 0.21% 36404ms 30.61% PCApply_BJacobi_Singleblock 0 0% 0.21% 33954ms 28.55% KSPSolve_PREONLY (partial-inline) 10ms 0.0084% 0.22% 32847ms 27.62% MatSolve 0 0% 0.22% 32847ms 27.62% PCApply_ICC 32344ms 27.20% 27.42% 32837ms 27.61% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1373ms 1.15% 28.57% 32770ms 27.55% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 28.57% 31426ms 26.42% KSP_PCApply.lto_priv.18 6833ms 5.75% 34.32% 28305ms 23.80% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0067% 34.33% 22315ms 18.76% MatMult 481ms 0.4% 34.73% 22307ms 18.76% MatMult_SeqAIJ (partial-inline) 21541ms 18.11% 52.84% 22047ms 18.54% MatMult_SeqAIJ_Inode (inline) 1963ms 1.65% 54.49% 14752ms 12.40% CardiacNewtonSolver::Solve 296ms 0.25% 54.74% 8966ms 7.54% AbstractCardiacTissue::UpdateCaches (inline) 4396ms 3.70% 58.44% 8607ms 7.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1849ms 1.55% 59.99% 8464ms 7.12% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1148ms 0.97% 60.96% 7895ms 6.64% BidomainSolver::SetupLinearSystem 1207ms 1.01% 61.97% 7319ms 6.15% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2ms 0.0017% 61.98% 6998ms 5.88% KSP_PCApply (partial-inline) 4ms 0.0034% 61.98% 6463ms 5.43% KSPConvergedDefault 5840ms 4.91% 66.89% 5840ms 4.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3921ms 3.30% 70.19% 3976ms 3.34% __ieee754_log_fma 0 0% 70.19% 3769ms 3.17% boost::numeric::ublas::norm_inf (inline) 2523ms 2.12% 72.31% 3769ms 3.17% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.31% 3769ms 3.17% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.31% 3769ms 3.17% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 8ms 0.0067% 72.31% 3328ms 2.80% MatNullSpaceRemove 23ms 0.019% 72.33% 3181ms 2.67% std::pow (inline) 420ms 0.35% 72.69% 3150ms 2.65% __pow 3071ms 2.58% 75.27% 3071ms 2.58% __memcpy_avx_unaligned_erms 0 0% 75.27% 3038ms 2.55% PetscMemcpy (inline) 1751ms 1.47% 76.74% 2923ms 2.46% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2776ms 2.33% 79.08% 2776ms 2.33% ddot_ 354ms 0.3% 79.37% 2723ms 2.29% __ieee754_pow_fma 19ms 0.016% 79.39% 2562ms 2.15% VecCopy 3ms 0.0025% 79.39% 2543ms 2.14% VecCopy_Seq (partial-inline) 14ms 0.012% 79.40% 2350ms 1.98% VecAXPY 6ms 0.005% 79.41% 2336ms 1.96% VecAXPY_Seq 2307ms 1.94% 81.35% 2307ms 1.94% daxpy_ 3ms 0.0025% 81.35% 2270ms 1.91% VecDot 0 0% 81.35% 2267ms 1.91% VecDot_Seq 0 0% 81.35% 2267ms 1.91% VecXDot_Seq_Private.constprop.0 2ms 0.0017% 81.35% 2111ms 1.78% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00084% 81.35% 1818ms 1.53% VecMDot 16ms 0.013% 81.37% 1817ms 1.53% VecMXDot_Private 1798ms 1.51% 82.88% 1800ms 1.51% VecMDot_Seq 38ms 0.032% 82.91% 1763ms 1.48% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1579ms 1.33% 84.24% 1656ms 1.39% exp_inline (inline) 7ms 0.0059% 84.24% 1502ms 1.26% VecMAXPY 1497ms 1.26% 85.50% 1497ms 1.26% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1482ms 1.25% 86.75% 1495ms 1.26% VecMAXPY_Seq 0 0% 86.75% 1441ms 1.21% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.75% 1165ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.75% 1165ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.75% 1165ms 0.98% boost_numeric_ublas_abs (inline) 1165ms 0.98% 87.73% 1165ms 0.98% std::abs (inline) 5ms 0.0042% 87.73% 1126ms 0.95% boost::numeric::ublas::matrix_assign (inline) 188ms 0.16% 87.89% 1118ms 0.94% boost::numeric::ublas::indexing_matrix_assign 2ms 0.0017% 87.89% 1103ms 0.93% KSP_RemoveNullSpace (inline) 0 0% 87.89% 1079ms 0.91% CuboidMeshConstructor::Construct 0 0% 87.89% 1078ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00084% 87.89% 1078ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 1072ms 0.9% 88.80% 1072ms 0.9% __memset_avx2_unaligned_erms 0 0% 88.80% 1060ms 0.89% PetscMemzero (inline) 771ms 0.65% 89.44% 1056ms 0.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 4ms 0.0034% 89.45% 995ms 0.84% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00084% 89.45% 980ms 0.82% Element::Element 2ms 0.0017% 89.45% 929ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 5ms 0.0042% 89.45% 882ms 0.74% BidomainAssembler::ComputeMatrixTerm 3ms 0.0025% 89.46% 882ms 0.74% VecDuplicate 882ms 0.74% 90.20% 882ms 0.74% [libchaste_heart.so] 12ms 0.01% 90.21% 868ms 0.73% boost::numeric::ublas::c_matrix::c_matrix (inline) 8ms 0.0067% 90.21% 866ms 0.73% VecScale 1ms 0.00084% 90.22% 858ms 0.72% VecScale_Seq 855ms 0.72% 90.93% 855ms 0.72% dscal_ 2ms 0.0017% 90.94% 787ms 0.66% VecNorm 1ms 0.00084% 90.94% 778ms 0.65% VecNorm_Seq 0 0% 90.94% 770ms 0.65% AbstractBidomainSolver::FinaliseLinearSystem 201ms 0.17% 91.11% 768ms 0.65% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.11% 737ms 0.62% BidomainProblem::WriteOneStep 11ms 0.0092% 91.12% 735ms 0.62% PetscMallocA 5ms 0.0042% 91.12% 724ms 0.61% PetscMallocAlign (partial-inline) 0 0% 91.12% 670ms 0.56% AbstractFeAssemblerInterface::Assemble (inline) 661ms 0.56% 91.68% 661ms 0.56% log_inline (inline)