File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12663ms, 87.05% of 14546ms total Dropped 703 nodes (cum <= 72.73ms) flat flat% sum% cum cum% 0 0% 0% 14536ms 99.93% __libc_start_call_main 0 0% 0% 14536ms 99.93% __libc_start_main_impl 0 0% 0% 14536ms 99.93% _start 0 0% 0% 14534ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14534ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14534ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14534ms 99.92% main 0 0% 0% 14495ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14495ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14495ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14474ms 99.51% AbstractCardiacProblem::Solve 4ms 0.027% 0.041% 11322ms 77.84% AbstractDynamicLinearPdeSolver::Solve 36ms 0.25% 0.29% 8893ms 61.14% AbstractCardiacTissue::SolveCellSystems 114ms 0.78% 1.07% 5394ms 37.08% AbstractCardiacCell::ComputeExceptVoltage 92ms 0.63% 1.70% 4671ms 32.11% AbstractOneStepIvpOdeSolver::InternalSolve 131ms 0.9% 2.61% 4038ms 27.76% EulerIvpOdeSolver::CalculateNextYValue 866ms 5.95% 8.56% 3865ms 26.57% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1693ms 11.64% 20.20% 3549ms 24.40% __GI___exp 1ms 0.0069% 20.20% 3093ms 21.26% MonodomainProblem::WriteOneStep 2ms 0.014% 20.22% 2973ms 20.44% Hdf5DataWriter::PutVector 0 0% 20.22% 2948ms 20.27% H5Dwrite 2ms 0.014% 20.23% 2924ms 20.10% H5D__write 82ms 0.56% 20.80% 2658ms 18.27% AbstractCardiacTissue::UpdateCaches (inline) 777ms 5.34% 26.14% 2539ms 17.45% CellLuoRudy1991FromCellML::GetIIonic 1620ms 11.14% 37.27% 1778ms 12.22% __ieee754_exp_fma 0 0% 37.27% 1642ms 11.29% H5D__chunk_collective_write 15ms 0.1% 37.38% 1642ms 11.29% H5F_set_coll_metadata_reads 2ms 0.014% 37.39% 1455ms 10.00% LinearSystem::Solve 13ms 0.089% 37.48% 1426ms 9.80% H5FD_s3comms_uriencode 0 0% 37.48% 1343ms 9.23% KSPSolve 1ms 0.0069% 37.49% 1343ms 9.23% KSPSolve_Private 6ms 0.041% 37.53% 1336ms 9.18% KSPSolve_CG 10ms 0.069% 37.60% 1194ms 8.21% H5D__chunk_cacheable 39ms 0.27% 37.87% 1101ms 7.57% 3ms 0.021% 37.89% 1094ms 7.52% H5F_block_write 1ms 0.0069% 37.89% 1091ms 7.50% H5FD_write 0 0% 37.89% 1091ms 7.50% H5F__accum_write 0 0% 37.89% 1091ms 7.50% H5PB_write 414ms 2.85% 40.74% 1046ms 7.19% H5S_select_iterate 2ms 0.014% 40.75% 1010ms 6.94% H5D__mpio_select_write 10ms 0.069% 40.82% 952ms 6.54% std::pow (inline) 464ms 3.19% 44.01% 945ms 6.50% MonodomainSolver::SetupLinearSystem 123ms 0.85% 44.86% 942ms 6.48% __pow 0 0% 44.86% 926ms 6.37% PMPI_File_write_at_all 907ms 6.24% 51.09% 910ms 6.26% __GI_pwritev64 105ms 0.72% 51.81% 819ms 5.63% __ieee754_pow_fma 0 0% 51.81% 721ms 4.96% PCApply 2ms 0.014% 51.83% 718ms 4.94% PCApply_BJacobi_Singleblock 0 0% 51.83% 675ms 4.64% KSPSolve_PREONLY 1ms 0.0069% 51.84% 672ms 4.62% MatSolve 0 0% 51.84% 672ms 4.62% PCApply_ICC 662ms 4.55% 56.39% 671ms 4.61% MatSolve_SeqSBAIJ_1_NaturalOrdering 64ms 0.44% 56.83% 645ms 4.43% H5D__chunk_set_sizes 313ms 2.15% 58.98% 640ms 4.40% CellLuoRudy1991FromCellML::VerifyStateVariables 7ms 0.048% 59.03% 583ms 4.01% MatMult 575ms 3.95% 62.98% 576ms 3.96% MatMult_SeqAIJ 1ms 0.0069% 62.99% 470ms 3.23% KSP_PCApply.lto_priv.7 51ms 0.35% 63.34% 413ms 2.84% H5S_mpio_space_type 367ms 2.52% 65.86% 367ms 2.52% log_inline (inline) 324ms 2.23% 68.09% 331ms 2.28% exp_inline (inline) 4ms 0.027% 68.11% 327ms 2.25% KSPConvergedDefault 0 0% 68.11% 252ms 1.73% KSP_PCApply 144ms 0.99% 69.10% 251ms 1.73% TimeStepper::TimeStepper 27ms 0.19% 69.29% 219ms 1.51% H5VM_chunk_index 196ms 1.35% 70.64% 196ms 1.35% [libchaste_heart.so] 51ms 0.35% 70.99% 193ms 1.33% __GI___libc_malloc 107ms 0.74% 71.72% 181ms 1.24% top12 (inline) 116ms 0.8% 72.52% 179ms 1.23% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 7ms 0.048% 72.57% 173ms 1.19% ompi_datatype_destroy 147ms 1.01% 73.58% 172ms 1.18% _int_malloc 139ms 0.96% 74.54% 171ms 1.18% AbstractOneStepIvpOdeSolver::Solve 5ms 0.034% 74.57% 171ms 1.18% MPI_Type_free 168ms 1.15% 75.73% 168ms 1.15% ddot_ 45ms 0.31% 76.03% 156ms 1.07% ompi_datatype_release_args 4ms 0.027% 76.06% 156ms 1.07% ompi_info_register_framework_params 29ms 0.2% 76.26% 153ms 1.05% __GI___libc_free 28ms 0.19% 76.45% 149ms 1.02% H5S_set_version 121ms 0.83% 77.29% 142ms 0.98% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 10ms 0.069% 77.35% 139ms 0.96% ompi_datatype_create 136ms 0.93% 78.29% 136ms 0.93% std::isinf (inline) 131ms 0.9% 79.19% 131ms 0.9% __ieee754_log_fma 23ms 0.16% 79.35% 127ms 0.87% AbstractCardiacCell::SetVoltage (partial-inline) 45ms 0.31% 79.66% 124ms 0.85% _int_free 51ms 0.35% 80.01% 121ms 0.83% H5VM_array_calc 121ms 0.83% 80.84% 121ms 0.83% TimeStepper::CalculateNextTime 0 0% 80.84% 119ms 0.82% Hdf5DataWriter::PutUnlimitedVariable 44ms 0.3% 81.14% 113ms 0.78% std::__cxx11::basic_string::basic_string 1ms 0.0069% 81.15% 106ms 0.73% VecTDot 0 0% 81.15% 105ms 0.72% VecTDot_Seq 1ms 0.0069% 81.16% 105ms 0.72% VecXDot_Seq_Private.constprop.0 104ms 0.71% 81.87% 104ms 0.71% H5VM_array_offset_pre 3ms 0.021% 81.89% 104ms 0.71% VecNorm 50ms 0.34% 82.24% 102ms 0.7% H5S_hyper_add_span_element 1ms 0.0069% 82.24% 102ms 0.7% PMPI_File_set_view 1ms 0.0069% 82.25% 100ms 0.69% VecDuplicate 4ms 0.027% 82.28% 99ms 0.68% VecDuplicate_MPI 97ms 0.67% 82.94% 97ms 0.67% __memcpy_avx_unaligned_erms 74ms 0.51% 83.45% 94ms 0.65% AbstractParameterisedSystem::GetAnyVariable 85ms 0.58% 84.04% 92ms 0.63% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0069% 84.04% 92ms 0.63% VecNorm_Seq 89ms 0.61% 84.66% 89ms 0.61% H5VM_chunk_index_scaled 3ms 0.021% 84.68% 89ms 0.61% PMPI_Type_create_resized 1ms 0.0069% 84.68% 85ms 0.58% ompi_datatype_duplicate 31ms 0.21% 84.90% 83ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 50ms 0.34% 85.24% 81ms 0.56% TimeStepper::AdvanceOneTimeStep 79ms 0.54% 85.78% 79ms 0.54% [libm.so.6] 79ms 0.54% 86.33% 79ms 0.54% std::vector::operator[] (inline) 74ms 0.51% 86.83% 74ms 0.51% asuint64 (inline) 32ms 0.22% 87.05% 73ms 0.5% H5S_select_iter_next