File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 383ms, 87.24% of 439ms total Dropped 176 nodes (cum <= 2.19ms) flat flat% sum% cum cum% 0 0% 0% 432ms 98.41% __libc_start_call_main 0 0% 0% 432ms 98.41% __libc_start_main_impl 0 0% 0% 432ms 98.41% _start 0 0% 0% 429ms 97.72% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 429ms 97.72% CxxTest::TestRunner::runAllTests 0 0% 0% 429ms 97.72% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 429ms 97.72% main 0 0% 0% 394ms 89.75% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 393ms 89.52% CxxTest::RealTestDescription::run 0 0% 0% 393ms 89.52% CxxTest::TestRunner::runTest (inline) 0 0% 0% 393ms 89.52% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 393ms 89.52% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 390ms 88.84% AbstractCardiacProblem::Solve 0 0% 0% 389ms 88.61% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 345ms 78.59% LinearSystem::Solve 0 0% 0% 344ms 78.36% KSPSolve 1ms 0.23% 0.23% 344ms 78.36% KSPSolve_Private 0 0% 0.23% 343ms 78.13% KSPSolve_CG 0 0% 0.23% 213ms 48.52% KSP_PCApply.lto_priv.7 0 0% 0.23% 204ms 46.47% PCApply 0 0% 0.23% 204ms 46.47% PCApply_BJacobi_Singleblock 0 0% 0.23% 171ms 38.95% KSPSolve_PREONLY (partial-inline) 0 0% 0.23% 158ms 35.99% MatSolve 150ms 34.17% 34.40% 158ms 35.99% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.40% 158ms 35.99% PCApply_ICC 1ms 0.23% 34.62% 64ms 14.58% MatMult 2ms 0.46% 35.08% 63ms 14.35% MatMult_SeqAIJ (partial-inline) 61ms 13.90% 48.97% 63ms 14.35% MatMult_SeqAIJ_Inode (inline) 49ms 11.16% 60.14% 49ms 11.16% ddot_ 1ms 0.23% 60.36% 41ms 9.34% AbstractCardiacTissue::SolveCellSystems 0 0% 60.36% 32ms 7.29% MatNullSpaceRemove 0 0% 60.36% 31ms 7.06% CxxTest::RealWorldDescription::setUp 0 0% 60.36% 31ms 7.06% PMPI_Init_thread 0 0% 60.36% 31ms 7.06% PetscInitialize 0 0% 60.36% 31ms 7.06% PetscSetup::setUpWorld 0 0% 60.36% 31ms 7.06% PetscSetupUtils::CommonSetup 0 0% 60.36% 31ms 7.06% PetscSetupUtils::InitialisePetsc 0 0% 60.36% 31ms 7.06% ompi_mpi_init 1ms 0.23% 60.59% 28ms 6.38% VecTDot 0 0% 60.59% 27ms 6.15% VecTDot_Seq 0 0% 60.59% 27ms 6.15% VecXDot_Seq_Private.constprop.0 0 0% 60.59% 25ms 5.69% 1ms 0.23% 60.82% 24ms 5.47% AbstractCardiacCell::ComputeExceptVoltage 0 0% 60.82% 22ms 5.01% VecMDot 1ms 0.23% 61.05% 22ms 5.01% VecMXDot_Private 0 0% 61.05% 22ms 5.01% VecNorm 0 0% 61.05% 22ms 5.01% VecNorm_Seq 0 0% 61.05% 22ms 5.01% orte_init 21ms 4.78% 65.83% 21ms 4.78% VecMDot_Seq 1ms 0.23% 66.06% 19ms 4.33% AbstractOneStepIvpOdeSolver::InternalSolve 4ms 0.91% 66.97% 15ms 3.42% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 66.97% 15ms 3.42% EulerIvpOdeSolver::CalculateNextYValue 0 0% 66.97% 13ms 2.96% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.46% 67.43% 13ms 2.96% CellLuoRudy1991FromCellML::GetIIonic 0 0% 67.43% 13ms 2.96% KSP_PCApply (partial-inline) 8ms 1.82% 69.25% 13ms 2.96% __GI___exp 0 0% 69.25% 13ms 2.96% hwloc_topology_load 0 0% 69.25% 12ms 2.73% __GI__dl_catch_exception 0 0% 69.25% 12ms 2.73% _dl_catch_error 0 0% 69.25% 12ms 2.73% _dlerror_run 0 0% 69.25% 11ms 2.51% VecDuplicate 11ms 2.51% 71.75% 11ms 2.51% __memcpy_avx_unaligned_erms 1ms 0.23% 71.98% 11ms 2.51% hwloc_linux_get_tid_last_cpu_location 0 0% 71.98% 10ms 2.28% PetscMemcpy (inline) 0 0% 71.98% 10ms 2.28% VecAYPX 10ms 2.28% 74.26% 10ms 2.28% VecAYPX_Seq 0 0% 74.26% 10ms 2.28% VecDuplicate_Seq 1ms 0.23% 74.49% 10ms 2.28% VecMAXPY 0 0% 74.49% 10ms 2.28% opal_stackframe_output 9ms 2.05% 76.54% 9ms 2.05% VecMAXPY_Seq 0 0% 76.54% 9ms 2.05% mca_base_framework_open 0 0% 76.54% 8ms 1.82% ___dlopen 1ms 0.23% 76.77% 8ms 1.82% __pow 0 0% 76.77% 8ms 1.82% _dl_open 0 0% 76.77% 8ms 1.82% dl_open_worker 0 0% 76.77% 8ms 1.82% dl_open_worker_begin 0 0% 76.77% 8ms 1.82% dlopen_doit 0 0% 76.77% 8ms 1.82% dlopen_implementation (inline) 0 0% 76.77% 8ms 1.82% mca_base_framework_components_register 0 0% 76.77% 8ms 1.82% mca_base_framework_register 0 0% 76.77% 8ms 1.82% std::pow (inline) 3ms 0.68% 77.45% 7ms 1.59% __ieee754_pow_fma 0 0% 77.45% 7ms 1.59% _dl_init 0 0% 77.45% 7ms 1.59% _dl_start_user 0 0% 77.45% 7ms 1.59% call_init (inline) 0 0% 77.45% 6ms 1.37% VecCreate 1ms 0.23% 77.68% 6ms 1.37% _dl_map_object 1ms 0.23% 77.90% 6ms 1.37% boost::serialization::singleton::get_instance 0 0% 77.90% 6ms 1.37% mca_base_component_find 0 0% 77.90% 6ms 1.37% mca_base_component_repository_open 1ms 0.23% 78.13% 5ms 1.14% VecAXPY 2ms 0.46% 78.59% 5ms 1.14% __cxa_finalize 4ms 0.91% 79.50% 5ms 1.14% __ieee754_exp_fma 5ms 1.14% 80.64% 5ms 1.14% __memset_avx2_unaligned_erms 0 0% 80.64% 5ms 1.14% _dl_call_fini 0 0% 80.64% 5ms 1.14% _dl_lookup_symbol_x 0 0% 80.64% 5ms 1.14% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 3ms 0.68% 81.32% 5ms 1.14% do_lookup_x 0 0% 81.32% 5ms 1.14% opal_hwloc_base_get_topology 0 0% 81.32% 5ms 1.14% orte_ess_base_proc_binding 0 0% 81.32% 4ms 0.91% CxxTest::RealWorldDescription::tearDown 0 0% 81.32% 4ms 0.91% PetscFinalize 0 0% 81.32% 4ms 0.91% PetscMallocA 0 0% 81.32% 4ms 0.91% PetscMallocAlign (partial-inline) 0 0% 81.32% 4ms 0.91% PetscMemzero (inline) 0 0% 81.32% 4ms 0.91% PetscSetup::tearDownWorld 0 0% 81.32% 4ms 0.91% PetscSetupUtils::CommonFinalize 0 0% 81.32% 4ms 0.91% VecAXPY_Seq 0 0% 81.32% 4ms 0.91% __dlclose 0 0% 81.32% 4ms 0.91% _dl_close 0 0% 81.32% 4ms 0.91% _dl_close_worker (inline) 1ms 0.23% 81.55% 4ms 0.91% _dl_runtime_resolve_xsavec 0 0% 81.55% 4ms 0.91% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.91% 82.46% 4ms 0.91% daxpy_ 3ms 0.68% 83.14% 4ms 0.91% malloc_consolidate 0 0% 83.14% 4ms 0.91% mca_base_component_repository_release 4ms 0.91% 84.05% 4ms 0.91% strcmp 0 0% 84.05% 3ms 0.68% AbstractCardiacProblem::Initialise 0 0% 84.05% 3ms 0.68% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.05% 3ms 0.68% BidomainSolver::SetupLinearSystem 1ms 0.23% 84.28% 3ms 0.68% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.28% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.23% 84.51% 3ms 0.68% PetscLogObjCreateDefault 1ms 0.23% 84.74% 3ms 0.68% VecCopy 0 0% 84.74% 3ms 0.68% VecDestroy 1ms 0.23% 84.97% 3ms 0.68% VecSetType 0 0% 84.97% 3ms 0.68% XOpenDisplay 0 0% 84.97% 3ms 0.68% [hwloc_gl.so] 0 0% 84.97% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 84.97% 3ms 0.68% _XConnectXCB 0 0% 84.97% 3ms 0.68% __GI___libc_free 3ms 0.68% 85.65% 3ms 0.68% __GI___libc_read 0 0% 85.65% 3ms 0.68% __GI_exit 3ms 0.68% 86.33% 3ms 0.68% __libc_connect 0 0% 86.33% 3ms 0.68% __run_exit_handlers 0 0% 86.33% 3ms 0.68% _dl_fini 0 0% 86.33% 3ms 0.68% _dl_fixup 0 0% 86.33% 3ms 0.68% _dl_map_object_deps 0 0% 86.33% 3ms 0.68% _dl_map_object_from_fd 1ms 0.23% 86.56% 3ms 0.68% _int_free 2ms 0.46% 87.02% 3ms 0.68% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 87.02% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_register 1ms 0.23% 87.24% 3ms 0.68% mca_base_var_group_register 0 0% 87.24% 3ms 0.68% mca_base_var_register 0 0% 87.24% 3ms 0.68% ompi_mpi_finalize 0 0% 87.24% 3ms 0.68% openaux 0 0% 87.24% 3ms 0.68% xcb_connect_to_display_with_auth_info