File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109700ms, 91.82% of 119478ms total Dropped 1127 nodes (cum <= 597.39ms) flat flat% sum% cum cum% 0 0% 0% 119463ms 100% __libc_start_call_main 0 0% 0% 119463ms 100% __libc_start_main_impl 0 0% 0% 119463ms 100% _start 0 0% 0% 119460ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119460ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119460ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119460ms 100% main 0 0% 0% 119429ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119429ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119429ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119429ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119429ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 119428ms 100% AbstractConvergenceTester::Converge 4ms 0.0033% 0.0033% 118177ms 98.91% AbstractCardiacProblem::Solve 10ms 0.0084% 0.012% 117427ms 98.28% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0075% 0.019% 65753ms 55.03% LinearSystem::Solve 1ms 0.00084% 0.02% 65243ms 54.61% KSPSolve 5ms 0.0042% 0.024% 65242ms 54.61% KSPSolve_Private 11ms 0.0092% 0.033% 64804ms 54.24% KSPSolve_SYMMLQ 200ms 0.17% 0.2% 42812ms 35.83% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.2% 36611ms 30.64% PCApply 5ms 0.0042% 0.21% 36597ms 30.63% PCApply_BJacobi_Singleblock 2ms 0.0017% 0.21% 34019ms 28.47% KSPSolve_PREONLY (partial-inline) 1325ms 1.11% 1.32% 33061ms 27.67% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 5ms 0.0042% 1.32% 32861ms 27.50% MatSolve 0 0% 1.32% 32861ms 27.50% PCApply_ICC 32361ms 27.09% 28.41% 32856ms 27.50% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0025% 28.41% 31663ms 26.50% KSP_PCApply.lto_priv.18 6935ms 5.80% 34.21% 28622ms 23.96% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0067% 34.22% 22187ms 18.57% MatMult 275ms 0.23% 34.45% 22179ms 18.56% MatMult_SeqAIJ (partial-inline) 21671ms 18.14% 52.59% 22178ms 18.56% MatMult_SeqAIJ_Inode (inline) 1992ms 1.67% 54.26% 14787ms 12.38% CardiacNewtonSolver::Solve 307ms 0.26% 54.51% 8890ms 7.44% AbstractCardiacTissue::UpdateCaches (inline) 4419ms 3.70% 58.21% 8647ms 7.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1908ms 1.60% 59.81% 8390ms 7.02% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1111ms 0.93% 60.74% 7777ms 6.51% BidomainSolver::SetupLinearSystem 1236ms 1.03% 61.77% 7387ms 6.18% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00084% 61.77% 6995ms 5.85% KSP_PCApply (partial-inline) 5ms 0.0042% 61.78% 6364ms 5.33% KSPConvergedDefault 5892ms 4.93% 66.71% 5892ms 4.93% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3928ms 3.29% 70.00% 3964ms 3.32% __ieee754_log_fma 0 0% 70.00% 3740ms 3.13% boost::numeric::ublas::norm_inf (inline) 2515ms 2.10% 72.10% 3740ms 3.13% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.10% 3740ms 3.13% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.10% 3740ms 3.13% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 6ms 0.005% 72.11% 3385ms 2.83% MatNullSpaceRemove 3364ms 2.82% 74.92% 3364ms 2.82% __memcpy_avx_unaligned_erms 0 0% 74.92% 3330ms 2.79% PetscMemcpy (inline) 28ms 0.023% 74.95% 3102ms 2.60% std::pow (inline) 407ms 0.34% 75.29% 3072ms 2.57% __pow 1774ms 1.48% 76.77% 2921ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 23ms 0.019% 76.79% 2875ms 2.41% VecCopy 5ms 0.0042% 76.79% 2848ms 2.38% VecCopy_Seq (partial-inline) 2795ms 2.34% 79.13% 2795ms 2.34% ddot_ 334ms 0.28% 79.41% 2657ms 2.22% __ieee754_pow_fma 8ms 0.0067% 79.42% 2405ms 2.01% VecAXPY 6ms 0.005% 79.43% 2397ms 2.01% VecAXPY_Seq 2377ms 1.99% 81.41% 2377ms 1.99% daxpy_ 5ms 0.0042% 81.42% 2280ms 1.91% VecDot 1ms 0.00084% 81.42% 2275ms 1.90% VecDot_Seq 2ms 0.0017% 81.42% 2274ms 1.90% VecXDot_Seq_Private.constprop.0 3ms 0.0025% 81.42% 2118ms 1.77% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00084% 81.43% 1922ms 1.61% VecMDot 11ms 0.0092% 81.43% 1921ms 1.61% VecMXDot_Private 1897ms 1.59% 83.02% 1905ms 1.59% VecMDot_Seq 35ms 0.029% 83.05% 1752ms 1.47% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1566ms 1.31% 84.36% 1610ms 1.35% exp_inline (inline) 1567ms 1.31% 85.67% 1567ms 1.31% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 4ms 0.0033% 85.68% 1457ms 1.22% VecMAXPY 1451ms 1.21% 86.89% 1453ms 1.22% VecMAXPY_Seq 0 0% 86.89% 1445ms 1.21% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1156ms 0.97% 87.86% 1156ms 0.97% __memset_avx2_unaligned_erms 9ms 0.0075% 87.87% 1153ms 0.97% boost::numeric::ublas::matrix_assign (inline) 0 0% 87.87% 1149ms 0.96% PetscMemzero (inline) 0 0% 87.87% 1141ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.87% 1141ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.87% 1141ms 0.95% boost_numeric_ublas_abs (inline) 1141ms 0.95% 88.82% 1141ms 0.95% std::abs (inline) 207ms 0.17% 88.99% 1135ms 0.95% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.99% 1105ms 0.92% CuboidMeshConstructor::Construct 0 0% 88.99% 1104ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0017% 89.00% 1104ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 815ms 0.68% 89.68% 1075ms 0.9% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00084% 89.68% 1004ms 0.84% Element::Element 1ms 0.00084% 89.68% 981ms 0.82% AbstractTetrahedralElement::CalculateJacobian 0 0% 89.68% 922ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0017% 89.68% 909ms 0.76% VecDuplicate 9ms 0.0075% 89.69% 879ms 0.74% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00084% 89.69% 866ms 0.72% BidomainAssembler::ComputeMatrixTerm 7ms 0.0059% 89.70% 808ms 0.68% VecScale 808ms 0.68% 90.37% 808ms 0.68% [libchaste_heart.so] 6ms 0.005% 90.38% 801ms 0.67% VecScale_Seq 4ms 0.0033% 90.38% 795ms 0.67% VecNorm 791ms 0.66% 91.04% 791ms 0.66% dscal_ 1ms 0.00084% 91.04% 784ms 0.66% VecNorm_Seq 1ms 0.00084% 91.04% 772ms 0.65% AbstractBidomainSolver::FinaliseLinearSystem 18ms 0.015% 91.06% 772ms 0.65% PetscMallocA 224ms 0.19% 91.25% 768ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 7ms 0.0059% 91.25% 754ms 0.63% PetscMallocAlign (partial-inline) 0 0% 91.25% 689ms 0.58% BidomainProblem::WriteOneStep 0 0% 91.25% 673ms 0.56% AbstractFeAssemblerInterface::Assemble (inline) 673ms 0.56% 91.82% 673ms 0.56% log_inline (inline)