File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12557ms, 85.45% of 14695ms total Dropped 710 nodes (cum <= 73.47ms) flat flat% sum% cum cum% 0 0% 0% 14688ms 100% __libc_start_call_main 0 0% 0% 14688ms 100% __libc_start_main_impl 0 0% 0% 14688ms 100% _start 0 0% 0% 14686ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14686ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14686ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14686ms 99.94% main 0 0% 0% 14647ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14647ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14647ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0068% 0.0068% 14626ms 99.53% AbstractCardiacProblem::Solve 3ms 0.02% 0.027% 11252ms 76.57% AbstractDynamicLinearPdeSolver::Solve 35ms 0.24% 0.27% 8991ms 61.18% AbstractCardiacTissue::SolveCellSystems 95ms 0.65% 0.91% 5402ms 36.76% AbstractCardiacCell::ComputeExceptVoltage 108ms 0.73% 1.65% 4654ms 31.67% AbstractOneStepIvpOdeSolver::InternalSolve 155ms 1.05% 2.70% 4009ms 27.28% EulerIvpOdeSolver::CalculateNextYValue 909ms 6.19% 8.89% 3811ms 25.93% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1699ms 11.56% 20.45% 3495ms 23.78% __GI___exp 1ms 0.0068% 20.46% 3319ms 22.59% MonodomainProblem::WriteOneStep 2ms 0.014% 20.47% 3141ms 21.37% H5Dwrite 2ms 0.014% 20.48% 3136ms 21.34% Hdf5DataWriter::PutVector 2ms 0.014% 20.50% 3111ms 21.17% H5D__write 110ms 0.75% 21.25% 2739ms 18.64% AbstractCardiacTissue::UpdateCaches (inline) 824ms 5.61% 26.85% 2588ms 17.61% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.014% 26.87% 1821ms 12.39% H5D__chunk_collective_write 18ms 0.12% 26.99% 1819ms 12.38% H5F_set_coll_metadata_reads 1551ms 10.55% 37.54% 1730ms 11.77% __ieee754_exp_fma 10ms 0.068% 37.61% 1623ms 11.04% H5FD_s3comms_uriencode 0 0% 37.61% 1520ms 10.34% LinearSystem::Solve 0 0% 37.61% 1414ms 9.62% KSPSolve 3ms 0.02% 37.63% 1414ms 9.62% KSPSolve_Private 5ms 0.034% 37.67% 1404ms 9.55% KSPSolve_CG 0 0% 37.67% 1287ms 8.76% H5F_block_write 0 0% 37.67% 1287ms 8.76% H5PB_write 3ms 0.02% 37.69% 1286ms 8.75% H5F__accum_write 4ms 0.027% 37.71% 1283ms 8.73% H5FD_write 51ms 0.35% 38.06% 1268ms 8.63% 2ms 0.014% 38.07% 1181ms 8.04% H5D__mpio_select_write 6ms 0.041% 38.12% 1155ms 7.86% H5D__chunk_cacheable 1ms 0.0068% 38.12% 1069ms 7.27% PMPI_File_write_at_all 1043ms 7.10% 45.22% 1046ms 7.12% __GI_pwritev64 335ms 2.28% 47.50% 958ms 6.52% H5S_select_iterate 4ms 0.027% 47.53% 939ms 6.39% std::pow (inline) 70ms 0.48% 48.00% 935ms 6.36% __pow 107ms 0.73% 48.73% 864ms 5.88% __ieee754_pow_fma 3ms 0.02% 48.75% 800ms 5.44% PCApply 0 0% 48.75% 796ms 5.42% PCApply_BJacobi_Singleblock 0 0% 48.75% 758ms 5.16% KSPSolve_PREONLY 0 0% 48.75% 754ms 5.13% MatSolve 739ms 5.03% 53.78% 754ms 5.13% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 53.78% 754ms 5.13% PCApply_ICC 360ms 2.45% 56.23% 719ms 4.89% MonodomainSolver::SetupLinearSystem 367ms 2.50% 58.73% 667ms 4.54% CellLuoRudy1991FromCellML::VerifyStateVariables 65ms 0.44% 59.17% 646ms 4.40% H5D__chunk_set_sizes 1ms 0.0068% 59.18% 540ms 3.67% KSP_PCApply.lto_priv.7 3ms 0.02% 59.20% 506ms 3.44% MatMult 499ms 3.40% 62.59% 503ms 3.42% MatMult_SeqAIJ 53ms 0.36% 62.95% 428ms 2.91% H5S_mpio_space_type 404ms 2.75% 65.70% 404ms 2.75% log_inline (inline) 1ms 0.0068% 65.71% 351ms 2.39% KSPConvergedDefault 320ms 2.18% 67.89% 322ms 2.19% exp_inline (inline) 0 0% 67.89% 264ms 1.80% KSP_PCApply 122ms 0.83% 68.72% 246ms 1.67% TimeStepper::TimeStepper 163ms 1.11% 69.83% 203ms 1.38% AbstractOneStepIvpOdeSolver::Solve 20ms 0.14% 69.96% 202ms 1.37% H5VM_chunk_index 111ms 0.76% 70.72% 202ms 1.37% top12 (inline) 46ms 0.31% 71.03% 193ms 1.31% __GI___libc_malloc 2ms 0.014% 71.04% 182ms 1.24% Hdf5DataWriter::PutUnlimitedVariable 150ms 1.02% 72.07% 182ms 1.24% _int_malloc 83ms 0.56% 72.63% 172ms 1.17% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 11ms 0.075% 72.71% 171ms 1.16% ompi_datatype_destroy 37ms 0.25% 72.96% 170ms 1.16% __GI___libc_free 2ms 0.014% 72.97% 165ms 1.12% MPI_Type_free 4ms 0.027% 73.00% 164ms 1.12% ompi_datatype_create 155ms 1.05% 74.05% 155ms 1.05% [libchaste_heart.so] 155ms 1.05% 75.11% 155ms 1.05% ddot_ 119ms 0.81% 75.92% 150ms 1.02% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 36ms 0.24% 76.16% 149ms 1.01% ompi_datatype_release_args 8ms 0.054% 76.22% 149ms 1.01% ompi_info_register_framework_params 11ms 0.075% 76.29% 140ms 0.95% H5S_set_version 138ms 0.94% 77.23% 138ms 0.94% TimeStepper::CalculateNextTime 54ms 0.37% 77.60% 133ms 0.91% _int_free 132ms 0.9% 78.50% 132ms 0.9% std::isinf (inline) 55ms 0.37% 78.87% 129ms 0.88% H5VM_array_calc 125ms 0.85% 79.72% 125ms 0.85% __ieee754_log_fma 20ms 0.14% 79.86% 122ms 0.83% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.0068% 79.86% 119ms 0.81% VecDuplicate 8ms 0.054% 79.92% 118ms 0.8% VecDuplicate_MPI 4ms 0.027% 79.95% 115ms 0.78% PMPI_File_set_view 3ms 0.02% 79.97% 108ms 0.73% VecNorm 32ms 0.22% 80.18% 106ms 0.72% std::__cxx11::basic_string::basic_string 54ms 0.37% 80.55% 105ms 0.71% H5S_hyper_add_span_element 78ms 0.53% 81.08% 101ms 0.69% AbstractParameterisedSystem::GetAnyVariable 101ms 0.69% 81.77% 101ms 0.69% asuint64 (inline) 52ms 0.35% 82.12% 99ms 0.67% AbstractCardiacCell::GetVoltage (partial-inline) 99ms 0.67% 82.80% 99ms 0.67% H5VM_array_offset_pre 2ms 0.014% 82.81% 96ms 0.65% VecNorm_Seq 3ms 0.02% 82.83% 95ms 0.65% ompi_datatype_duplicate 1ms 0.0068% 82.84% 93ms 0.63% H5D__chunk_allocated 1ms 0.0068% 82.84% 91ms 0.62% H5D__select_write 6ms 0.041% 82.89% 90ms 0.61% H5Dgather 0 0% 82.89% 90ms 0.61% PMPI_Type_create_resized 2ms 0.014% 82.90% 89ms 0.61% VecTDot 88ms 0.6% 83.50% 88ms 0.6% H5VM_chunk_index_scaled 88ms 0.6% 84.10% 88ms 0.6% __memcpy_avx_unaligned_erms 28ms 0.19% 84.29% 87ms 0.59% __libc_calloc 76ms 0.52% 84.80% 85ms 0.58% AbstractParameterisedSystem::SetAnyVariable 0 0% 84.80% 85ms 0.58% VecTDot_Seq 1ms 0.0068% 84.81% 85ms 0.58% VecXDot_Seq_Private.constprop.0 1ms 0.0068% 84.82% 84ms 0.57% H5D__contig_fill 4ms 0.027% 84.85% 83ms 0.56% H5VM_opvv 3ms 0.02% 84.87% 81ms 0.55% H5P_create_id 0 0% 84.87% 81ms 0.55% H5Pcreate 47ms 0.32% 85.19% 81ms 0.55% TimeStepper::AdvanceOneTimeStep 0 0% 85.19% 79ms 0.54% H5D__contig_write 36ms 0.24% 85.43% 74ms 0.5% H5S_select_iter_next 3ms 0.02% 85.45% 74ms 0.5% opal_datatype_create_desc