File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 382ms, 87.61% of 436ms total Dropped 181 nodes (cum <= 2.18ms) flat flat% sum% cum cum% 0 0% 0% 428ms 98.17% __libc_start_call_main 0 0% 0% 428ms 98.17% __libc_start_main_impl 0 0% 0% 428ms 98.17% _start 0 0% 0% 425ms 97.48% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 425ms 97.48% CxxTest::TestRunner::runAllTests 0 0% 0% 425ms 97.48% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 425ms 97.48% main 0 0% 0% 392ms 89.91% CxxTest::RealTestDescription::run 0 0% 0% 392ms 89.91% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 392ms 89.91% CxxTest::TestRunner::runTest (inline) 0 0% 0% 392ms 89.91% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 392ms 89.91% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 389ms 89.22% AbstractCardiacProblem::Solve 0 0% 0% 387ms 88.76% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 351ms 80.50% KSPSolve 1ms 0.23% 0.23% 351ms 80.50% KSPSolve_Private 0 0% 0.23% 351ms 80.50% LinearSystem::Solve 0 0% 0.23% 350ms 80.28% KSPSolve_CG 0 0% 0.23% 221ms 50.69% KSP_PCApply.lto_priv.7 0 0% 0.23% 213ms 48.85% PCApply 0 0% 0.23% 212ms 48.62% PCApply_BJacobi_Singleblock 0 0% 0.23% 176ms 40.37% KSPSolve_PREONLY (partial-inline) 0 0% 0.23% 159ms 36.47% MatSolve 155ms 35.55% 35.78% 159ms 36.47% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.78% 159ms 36.47% PCApply_ICC 0 0% 35.78% 60ms 13.76% MatMult 2ms 0.46% 36.24% 60ms 13.76% MatMult_SeqAIJ (partial-inline) 58ms 13.30% 49.54% 60ms 13.76% MatMult_SeqAIJ_Inode (inline) 47ms 10.78% 60.32% 47ms 10.78% ddot_ 1ms 0.23% 60.55% 40ms 9.17% MatNullSpaceRemove 0 0% 60.55% 30ms 6.88% CxxTest::RealWorldDescription::setUp 0 0% 60.55% 30ms 6.88% PetscSetup::setUpWorld 0 0% 60.55% 30ms 6.88% PetscSetupUtils::CommonSetup 0 0% 60.55% 30ms 6.88% VecTDot 0 0% 60.55% 30ms 6.88% VecTDot_Seq 0 0% 60.55% 30ms 6.88% VecXDot_Seq_Private.constprop.0 0 0% 60.55% 29ms 6.65% PMPI_Init_thread 0 0% 60.55% 29ms 6.65% PetscInitialize 0 0% 60.55% 29ms 6.65% PetscSetupUtils::InitialisePetsc 0 0% 60.55% 29ms 6.65% ompi_mpi_init 0 0% 60.55% 28ms 6.42% AbstractCardiacTissue::SolveCellSystems 1ms 0.23% 60.78% 22ms 5.05% 0 0% 60.78% 22ms 5.05% VecMDot 21ms 4.82% 65.60% 22ms 5.05% VecMDot_Seq 0 0% 65.60% 22ms 5.05% VecMXDot_Private 0 0% 65.60% 19ms 4.36% KSP_PCApply (partial-inline) 0 0% 65.60% 19ms 4.36% orte_init 0 0% 65.60% 18ms 4.13% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.60% 17ms 3.90% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 65.60% 17ms 3.90% VecMAXPY 17ms 3.90% 69.50% 17ms 3.90% VecMAXPY_Seq 0 0% 69.50% 17ms 3.90% VecNorm 0 0% 69.50% 17ms 3.90% VecNorm_Seq 2ms 0.46% 69.95% 15ms 3.44% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.95% 15ms 3.44% EulerIvpOdeSolver::CalculateNextYValue 0 0% 69.95% 15ms 3.44% __GI__dl_catch_exception 0 0% 69.95% 15ms 3.44% _dl_catch_error 0 0% 69.95% 15ms 3.44% _dlerror_run 0 0% 69.95% 14ms 3.21% VecDuplicate 0 0% 69.95% 14ms 3.21% VecDuplicate_Seq 0 0% 69.95% 14ms 3.21% opal_stackframe_output 6ms 1.38% 71.33% 13ms 2.98% __GI___exp 0 0% 71.33% 12ms 2.75% ___dlopen 0 0% 71.33% 12ms 2.75% _dl_open 0 0% 71.33% 12ms 2.75% dl_open_worker 0 0% 71.33% 12ms 2.75% dlopen_doit 0 0% 71.33% 12ms 2.75% dlopen_implementation (inline) 0 0% 71.33% 12ms 2.75% hwloc_topology_load 0 0% 71.33% 12ms 2.75% mca_base_framework_components_register 0 0% 71.33% 12ms 2.75% mca_base_framework_open 0 0% 71.33% 12ms 2.75% mca_base_framework_register 0 0% 71.33% 11ms 2.52% VecAYPX 11ms 2.52% 73.85% 11ms 2.52% VecAYPX_Seq 0 0% 73.85% 11ms 2.52% _dl_lookup_symbol_x 1ms 0.23% 74.08% 11ms 2.52% dl_open_worker_begin 0 0% 74.08% 11ms 2.52% mca_base_component_find 0 0% 74.08% 11ms 2.52% mca_base_component_repository_open 0 0% 74.08% 10ms 2.29% hwloc_linux_get_tid_last_cpu_location 1ms 0.23% 74.31% 8ms 1.83% BidomainSolver::SetupLinearSystem 0 0% 74.31% 8ms 1.83% PetscMemcpy (inline) 0 0% 74.31% 8ms 1.83% PetscMemzero (inline) 1ms 0.23% 74.54% 8ms 1.83% VecCreate 8ms 1.83% 76.38% 8ms 1.83% __memcpy_avx_unaligned_erms 8ms 1.83% 78.21% 8ms 1.83% __memset_avx2_unaligned_erms 0 0% 78.21% 8ms 1.83% _dl_init 0 0% 78.21% 8ms 1.83% call_init (inline) 7ms 1.61% 79.82% 8ms 1.83% do_lookup_x 0 0% 79.82% 7ms 1.61% VecAXPY 0 0% 79.82% 7ms 1.61% VecAXPY_Seq 0 0% 79.82% 7ms 1.61% VecSetType 0 0% 79.82% 7ms 1.61% _dl_start_user 7ms 1.61% 81.42% 7ms 1.61% daxpy_ 0 0% 81.42% 6ms 1.38% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.46% 81.88% 6ms 1.38% CellLuoRudy1991FromCellML::GetIIonic 0 0% 81.88% 6ms 1.38% PetscMallocA 0 0% 81.88% 6ms 1.38% PetscMallocAlign (partial-inline) 0 0% 81.88% 6ms 1.38% VecCreate_Seq 6ms 1.38% 83.26% 6ms 1.38% __ieee754_exp_fma 0 0% 83.26% 6ms 1.38% _dl_fixup 0 0% 83.26% 6ms 1.38% _dl_open_relocate_one_object (inline) 0 0% 83.26% 6ms 1.38% _dl_relocate_object 0 0% 83.26% 6ms 1.38% _dl_runtime_resolve_xsavec 1ms 0.23% 83.49% 6ms 1.38% boost::serialization::singleton::get_instance 0 0% 83.49% 6ms 1.38% elf_dynamic_do_Rela (inline) 1ms 0.23% 83.72% 5ms 1.15% VecCopy 5ms 1.15% 84.86% 5ms 1.15% __GI___libc_read 0 0% 84.86% 5ms 1.15% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 84.86% 5ms 1.15% elf_machine_rela (inline) 0 0% 84.86% 5ms 1.15% resolve_map (inline) 0 0% 84.86% 4ms 0.92% KSPConvergedDefault 0 0% 84.86% 4ms 0.92% PetscHeaderCreate_Private 0 0% 84.86% 4ms 0.92% VecCopy_Seq (partial-inline) 0 0% 84.86% 4ms 0.92% _dl_map_object 1ms 0.23% 85.09% 4ms 0.92% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 85.09% 4ms 0.92% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 85.09% 4ms 0.92% opal_hwloc_base_get_topology 0 0% 85.09% 4ms 0.92% orte_ess_base_proc_binding 0 0% 85.09% 3ms 0.69% AbstractCardiacProblem::Initialise 0 0% 85.09% 3ms 0.69% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 85.09% 3ms 0.69% CxxTest::RealWorldDescription::tearDown 0 0% 85.09% 3ms 0.69% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.09% 3ms 0.69% PetscFinalize 0 0% 85.09% 3ms 0.69% PetscSetup::tearDownWorld 0 0% 85.09% 3ms 0.69% PetscSetupUtils::CommonFinalize 0 0% 85.09% 3ms 0.69% __GI_exit 0 0% 85.09% 3ms 0.69% __cxa_finalize 0 0% 85.09% 3ms 0.69% __dlclose 0 0% 85.09% 3ms 0.69% __ieee754_pow_fma 0 0% 85.09% 3ms 0.69% __pow 0 0% 85.09% 3ms 0.69% __run_exit_handlers 3ms 0.69% 85.78% 3ms 0.69% __strcmp_avx2 0 0% 85.78% 3ms 0.69% _dl_call_fini 0 0% 85.78% 3ms 0.69% _dl_close 0 0% 85.78% 3ms 0.69% _dl_close_worker (inline) 0 0% 85.78% 3ms 0.69% _dl_fini 3ms 0.69% 86.47% 3ms 0.69% _dl_new_hash (inline) 3ms 0.69% 87.16% 3ms 0.69% _int_malloc 0 0% 87.16% 3ms 0.69% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 2ms 0.46% 87.61% 3ms 0.69% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 87.61% 3ms 0.69% mca_base_component_repository_release 0 0% 87.61% 3ms 0.69% ompi_mpi_finalize 0 0% 87.61% 3ms 0.69% std::pow (inline)