File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109523ms, 91.75% of 119372ms total Dropped 1124 nodes (cum <= 596.86ms) flat flat% sum% cum cum% 0 0% 0% 119357ms 100% __libc_start_call_main 0 0% 0% 119357ms 100% __libc_start_main_impl 0 0% 0% 119357ms 100% _start 0 0% 0% 119354ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119354ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119354ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119354ms 100% main 0 0% 0% 119319ms 100% AbstractConvergenceTester::Converge 0 0% 0% 119319ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119319ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119319ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119319ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119319ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00084% 0.00084% 118065ms 98.91% AbstractCardiacProblem::Solve 4ms 0.0034% 0.0042% 117236ms 98.21% AbstractDynamicLinearPdeSolver::Solve 6ms 0.005% 0.0092% 65765ms 55.09% LinearSystem::Solve 0 0% 0.0092% 65308ms 54.71% KSPSolve 8ms 0.0067% 0.016% 65308ms 54.71% KSPSolve_Private 13ms 0.011% 0.027% 64896ms 54.36% KSPSolve_SYMMLQ 196ms 0.16% 0.19% 42538ms 35.63% AbstractCardiacTissue::SolveCellSystems 9ms 0.0075% 0.2% 37215ms 31.18% PCApply 1ms 0.00084% 0.2% 37204ms 31.17% PCApply_BJacobi_Singleblock 0 0% 0.2% 34736ms 29.10% KSPSolve_PREONLY (partial-inline) 4ms 0.0034% 0.2% 33605ms 28.15% PCApply_ICC 6ms 0.005% 0.21% 33601ms 28.15% MatSolve 33094ms 27.72% 27.93% 33595ms 28.14% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1397ms 1.17% 29.10% 32757ms 27.44% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 29.10% 31968ms 26.78% KSP_PCApply.lto_priv.18 6908ms 5.79% 34.89% 28322ms 23.73% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 12ms 0.01% 34.90% 21914ms 18.36% MatMult 272ms 0.23% 35.13% 21902ms 18.35% MatMult_SeqAIJ (partial-inline) 21423ms 17.95% 53.07% 21900ms 18.35% MatMult_SeqAIJ_Inode (inline) 1998ms 1.67% 54.75% 14725ms 12.34% CardiacNewtonSolver::Solve 294ms 0.25% 54.99% 8947ms 7.50% AbstractCardiacTissue::UpdateCaches (inline) 4397ms 3.68% 58.68% 8586ms 7.19% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1968ms 1.65% 60.33% 8452ms 7.08% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1141ms 0.96% 61.28% 7809ms 6.54% BidomainSolver::SetupLinearSystem 0 0% 61.28% 7238ms 6.06% KSP_PCApply (partial-inline) 1103ms 0.92% 62.21% 7155ms 5.99% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 4ms 0.0034% 62.21% 6608ms 5.54% KSPConvergedDefault 5793ms 4.85% 67.06% 5793ms 4.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3869ms 3.24% 70.30% 3905ms 3.27% __ieee754_log_fma 0 0% 70.30% 3710ms 3.11% boost::numeric::ublas::norm_inf (inline) 2506ms 2.10% 72.40% 3710ms 3.11% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.40% 3710ms 3.11% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.40% 3710ms 3.11% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0059% 72.41% 3337ms 2.80% MatNullSpaceRemove 35ms 0.029% 72.44% 3209ms 2.69% std::pow (inline) 399ms 0.33% 72.77% 3170ms 2.66% __pow 3121ms 2.61% 75.39% 3121ms 2.61% __memcpy_avx_unaligned_erms 0 0% 75.39% 3078ms 2.58% PetscMemcpy (inline) 1715ms 1.44% 76.82% 2870ms 2.40% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 376ms 0.31% 77.14% 2757ms 2.31% __ieee754_pow_fma 2702ms 2.26% 79.40% 2702ms 2.26% ddot_ 23ms 0.019% 79.42% 2610ms 2.19% VecCopy 2ms 0.0017% 79.42% 2586ms 2.17% VecCopy_Seq (partial-inline) 21ms 0.018% 79.44% 2503ms 2.10% VecAXPY 9ms 0.0075% 79.45% 2482ms 2.08% VecAXPY_Seq 2461ms 2.06% 81.51% 2461ms 2.06% daxpy_ 3ms 0.0025% 81.51% 2191ms 1.84% VecDot 1ms 0.00084% 81.51% 2188ms 1.83% VecDot_Seq 2ms 0.0017% 81.51% 2187ms 1.83% VecXDot_Seq_Private.constprop.0 5ms 0.0042% 81.52% 2113ms 1.77% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 81.52% 1888ms 1.58% VecMDot 9ms 0.0075% 81.53% 1886ms 1.58% VecMXDot_Private 1862ms 1.56% 83.09% 1868ms 1.56% VecMDot_Seq 35ms 0.029% 83.12% 1771ms 1.48% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1550ms 1.30% 84.42% 1622ms 1.36% exp_inline (inline) 1478ms 1.24% 85.65% 1478ms 1.24% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 85.65% 1442ms 1.21% AbstractFeAssemblerInterface::AssembleMatrix (inline) 8ms 0.0067% 85.66% 1442ms 1.21% VecMAXPY 1428ms 1.20% 86.86% 1434ms 1.20% VecMAXPY_Seq 7ms 0.0059% 86.86% 1183ms 0.99% boost::numeric::ublas::matrix_assign (inline) 249ms 0.21% 87.07% 1173ms 0.98% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.07% 1130ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.07% 1130ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.07% 1130ms 0.95% boost_numeric_ublas_abs (inline) 1130ms 0.95% 88.02% 1130ms 0.95% std::abs (inline) 0 0% 88.02% 1104ms 0.92% CuboidMeshConstructor::Construct 0 0% 88.02% 1103ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 4ms 0.0034% 88.02% 1103ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 781ms 0.65% 88.68% 1042ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1014ms 0.85% 89.53% 1014ms 0.85% __memset_avx2_unaligned_erms 0 0% 89.53% 994ms 0.83% PetscMemzero (inline) 4ms 0.0034% 89.53% 993ms 0.83% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00084% 89.53% 989ms 0.83% Element::Element 3ms 0.0025% 89.53% 934ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 891ms 0.75% 90.28% 891ms 0.75% [libchaste_heart.so] 7ms 0.0059% 90.28% 886ms 0.74% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 90.28% 884ms 0.74% BidomainAssembler::ComputeMatrixTerm 0 0% 90.28% 859ms 0.72% VecDuplicate 2ms 0.0017% 90.29% 838ms 0.7% AbstractBidomainSolver::FinaliseLinearSystem 224ms 0.19% 90.47% 833ms 0.7% AbstractBidomainSolver::CheckCompatibilityCondition 8ms 0.0067% 90.48% 788ms 0.66% VecScale 1ms 0.00084% 90.48% 780ms 0.65% VecScale_Seq 776ms 0.65% 91.13% 776ms 0.65% dscal_ 0 0% 91.13% 766ms 0.64% BidomainProblem::WriteOneStep 2ms 0.0017% 91.13% 762ms 0.64% VecNorm 0 0% 91.13% 748ms 0.63% VecNorm_Seq 717ms 0.6% 91.73% 717ms 0.6% log_inline (inline) 11ms 0.0092% 91.74% 715ms 0.6% PetscMallocA 8ms 0.0067% 91.75% 704ms 0.59% PetscMallocAlign (partial-inline) 0 0% 91.75% 671ms 0.56% AbstractFeAssemblerInterface::Assemble (inline)