File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12515ms, 85.20% of 14689ms total Dropped 745 nodes (cum <= 73.44ms) flat flat% sum% cum cum% 0 0% 0% 14681ms 99.95% __libc_start_call_main 0 0% 0% 14681ms 99.95% __libc_start_main_impl 0 0% 0% 14681ms 99.95% _start 0 0% 0% 14678ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14678ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14678ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14678ms 99.93% main 0 0% 0% 14645ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14645ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14645ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14624ms 99.56% AbstractCardiacProblem::Solve 1ms 0.0068% 0.0068% 11324ms 77.09% AbstractDynamicLinearPdeSolver::Solve 40ms 0.27% 0.28% 8978ms 61.12% AbstractCardiacTissue::SolveCellSystems 117ms 0.8% 1.08% 5451ms 37.11% AbstractCardiacCell::ComputeExceptVoltage 101ms 0.69% 1.76% 4715ms 32.10% AbstractOneStepIvpOdeSolver::InternalSolve 141ms 0.96% 2.72% 4073ms 27.73% EulerIvpOdeSolver::CalculateNextYValue 930ms 6.33% 9.05% 3882ms 26.43% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1684ms 11.46% 20.52% 3574ms 24.33% __GI___exp 2ms 0.014% 20.53% 3233ms 22.01% MonodomainProblem::WriteOneStep 2ms 0.014% 20.55% 3076ms 20.94% Hdf5DataWriter::PutVector 2ms 0.014% 20.56% 3070ms 20.90% H5Dwrite 5ms 0.034% 20.59% 3036ms 20.67% H5D__write 108ms 0.74% 21.33% 2678ms 18.23% AbstractCardiacTissue::UpdateCaches (inline) 777ms 5.29% 26.62% 2539ms 17.29% CellLuoRudy1991FromCellML::GetIIonic 1657ms 11.28% 37.90% 1820ms 12.39% __ieee754_exp_fma 4ms 0.027% 37.93% 1765ms 12.02% H5D__chunk_collective_write 17ms 0.12% 38.04% 1761ms 11.99% H5F_set_coll_metadata_reads 3ms 0.02% 38.06% 1562ms 10.63% LinearSystem::Solve 20ms 0.14% 38.20% 1546ms 10.52% H5FD_s3comms_uriencode 0 0% 38.20% 1461ms 9.95% KSPSolve 2ms 0.014% 38.21% 1461ms 9.95% KSPSolve_Private 2ms 0.014% 38.23% 1453ms 9.89% KSPSolve_CG 3ms 0.02% 38.25% 1180ms 8.03% H5F_block_write 47ms 0.32% 38.57% 1179ms 8.03% 2ms 0.014% 38.58% 1177ms 8.01% H5F__accum_write 0 0% 38.58% 1177ms 8.01% H5PB_write 0 0% 38.58% 1175ms 8.00% H5FD_write 13ms 0.089% 38.67% 1149ms 7.82% H5D__chunk_cacheable 1ms 0.0068% 38.68% 1085ms 7.39% H5D__mpio_select_write 0 0% 38.68% 980ms 6.67% PMPI_File_write_at_all 414ms 2.82% 41.49% 958ms 6.52% H5S_select_iterate 948ms 6.45% 47.95% 951ms 6.47% __GI_pwritev64 3ms 0.02% 47.97% 900ms 6.13% std::pow (inline) 97ms 0.66% 48.63% 897ms 6.11% __pow 4ms 0.027% 48.66% 858ms 5.84% PCApply 1ms 0.0068% 48.66% 851ms 5.79% PCApply_BJacobi_Singleblock 123ms 0.84% 49.50% 799ms 5.44% __ieee754_pow_fma 2ms 0.014% 49.51% 797ms 5.43% KSPSolve_PREONLY 1ms 0.0068% 49.52% 794ms 5.41% PCApply_ICC 3ms 0.02% 49.54% 793ms 5.40% MatSolve 780ms 5.31% 54.85% 790ms 5.38% MatSolve_SeqSBAIJ_1_NaturalOrdering 356ms 2.42% 57.27% 764ms 5.20% MonodomainSolver::SetupLinearSystem 349ms 2.38% 59.65% 653ms 4.45% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0068% 59.66% 614ms 4.18% KSP_PCApply.lto_priv.7 56ms 0.38% 60.04% 566ms 3.85% H5D__chunk_set_sizes 2ms 0.014% 60.05% 507ms 3.45% MatMult 502ms 3.42% 63.47% 505ms 3.44% MatMult_SeqAIJ 48ms 0.33% 63.80% 453ms 3.08% H5S_mpio_space_type 381ms 2.59% 66.39% 381ms 2.59% log_inline (inline) 2ms 0.014% 66.40% 318ms 2.16% KSPConvergedDefault 261ms 1.78% 68.18% 265ms 1.80% exp_inline (inline) 132ms 0.9% 69.08% 264ms 1.80% TimeStepper::TimeStepper 0 0% 69.08% 247ms 1.68% KSP_PCApply 195ms 1.33% 70.41% 225ms 1.53% AbstractOneStepIvpOdeSolver::Solve 46ms 0.31% 70.72% 195ms 1.33% __GI___libc_malloc 6ms 0.041% 70.76% 187ms 1.27% ompi_datatype_destroy 101ms 0.69% 71.45% 187ms 1.27% top12 (inline) 36ms 0.25% 71.69% 186ms 1.27% __GI___libc_free 159ms 1.08% 72.78% 186ms 1.27% _int_malloc 9ms 0.061% 72.84% 180ms 1.23% MPI_Type_free 176ms 1.20% 74.03% 176ms 1.20% [libchaste_heart.so] 174ms 1.18% 75.22% 174ms 1.18% ddot_ 4ms 0.027% 75.25% 166ms 1.13% ompi_datatype_create 11ms 0.075% 75.32% 166ms 1.13% ompi_info_register_framework_params 49ms 0.33% 75.66% 164ms 1.12% ompi_datatype_release_args 144ms 0.98% 76.64% 158ms 1.08% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 2ms 0.014% 76.65% 155ms 1.06% Hdf5DataWriter::PutUnlimitedVariable 18ms 0.12% 76.77% 153ms 1.04% H5VM_chunk_index 65ms 0.44% 77.21% 150ms 1.02% _int_free 146ms 0.99% 78.21% 146ms 0.99% std::isinf (inline) 145ms 0.99% 79.20% 145ms 0.99% TimeStepper::CalculateNextTime 75ms 0.51% 79.71% 140ms 0.95% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 26ms 0.18% 79.88% 127ms 0.86% H5S_set_version 25ms 0.17% 80.05% 120ms 0.82% AbstractCardiacCell::SetVoltage (partial-inline) 120ms 0.82% 80.87% 120ms 0.82% __ieee754_log_fma 0 0% 80.87% 117ms 0.8% PMPI_File_set_view 1ms 0.0068% 80.88% 112ms 0.76% VecNorm 61ms 0.42% 81.29% 107ms 0.73% H5S_hyper_add_span_element 1ms 0.0068% 81.30% 107ms 0.73% VecNorm_Seq 3ms 0.02% 81.32% 106ms 0.72% PMPI_Type_create_resized 35ms 0.24% 81.56% 101ms 0.69% H5VM_array_calc 4ms 0.027% 81.58% 101ms 0.69% ompi_datatype_duplicate 1ms 0.0068% 81.59% 99ms 0.67% VecTDot 98ms 0.67% 82.26% 98ms 0.67% __memcpy_avx_unaligned_erms 0 0% 82.26% 97ms 0.66% VecTDot_Seq 0 0% 82.26% 97ms 0.66% VecXDot_Seq_Private.constprop.0 96ms 0.65% 82.91% 96ms 0.65% asuint64 (inline) 33ms 0.22% 83.14% 95ms 0.65% std::__cxx11::basic_string::basic_string 1ms 0.0068% 83.14% 94ms 0.64% VecDuplicate 1ms 0.0068% 83.15% 93ms 0.63% VecDuplicate_MPI 28ms 0.19% 83.34% 86ms 0.59% __libc_calloc 1ms 0.0068% 83.35% 86ms 0.59% opal_datatype_create_desc 74ms 0.5% 83.85% 85ms 0.58% AbstractParameterisedSystem::SetAnyVariable 85ms 0.58% 84.43% 85ms 0.58% H5VM_chunk_index_scaled 66ms 0.45% 84.88% 84ms 0.57% AbstractParameterisedSystem::GetAnyVariable 6ms 0.041% 84.92% 78ms 0.53% MPI_Type_create_hindexed 1ms 0.0068% 84.93% 76ms 0.52% H5D__chunk_allocated 3ms 0.02% 84.95% 74ms 0.5% H5D__select_write 29ms 0.2% 85.15% 74ms 0.5% H5S__hyper_rebuild 8ms 0.054% 85.20% 74ms 0.5% opal_dss_print_buffer_contents