File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12490ms, 84.84% of 14722ms total Dropped 766 nodes (cum <= 73.61ms) flat flat% sum% cum cum% 0 0% 0% 14714ms 99.95% __libc_start_call_main 0 0% 0% 14714ms 99.95% __libc_start_main_impl 0 0% 0% 14714ms 99.95% _start 0 0% 0% 14712ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14712ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14712ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14712ms 99.93% main 0 0% 0% 14674ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14674ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14674ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 4ms 0.027% 0.027% 14652ms 99.52% AbstractCardiacProblem::Solve 5ms 0.034% 0.061% 11295ms 76.72% AbstractDynamicLinearPdeSolver::Solve 51ms 0.35% 0.41% 8962ms 60.87% AbstractCardiacTissue::SolveCellSystems 122ms 0.83% 1.24% 5468ms 37.14% AbstractCardiacCell::ComputeExceptVoltage 93ms 0.63% 1.87% 4743ms 32.22% AbstractOneStepIvpOdeSolver::InternalSolve 136ms 0.92% 2.79% 4128ms 28.04% EulerIvpOdeSolver::CalculateNextYValue 924ms 6.28% 9.07% 3945ms 26.80% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1732ms 11.76% 20.83% 3562ms 24.20% __GI___exp 0 0% 20.83% 3281ms 22.29% MonodomainProblem::WriteOneStep 5ms 0.034% 20.87% 3120ms 21.19% Hdf5DataWriter::PutVector 0 0% 20.87% 3095ms 21.02% H5Dwrite 1ms 0.0068% 20.87% 3058ms 20.77% H5D__write 103ms 0.7% 21.57% 2594ms 17.62% AbstractCardiacTissue::UpdateCaches (inline) 805ms 5.47% 27.04% 2450ms 16.64% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0068% 27.05% 1824ms 12.39% H5D__chunk_collective_write 14ms 0.095% 27.14% 1823ms 12.38% H5F_set_coll_metadata_reads 1599ms 10.86% 38.00% 1749ms 11.88% __ieee754_exp_fma 12ms 0.082% 38.09% 1603ms 10.89% H5FD_s3comms_uriencode 2ms 0.014% 38.10% 1543ms 10.48% LinearSystem::Solve 2ms 0.014% 38.11% 1424ms 9.67% KSPSolve 2ms 0.014% 38.13% 1422ms 9.66% KSPSolve_Private 6ms 0.041% 38.17% 1409ms 9.57% KSPSolve_CG 54ms 0.37% 38.53% 1260ms 8.56% 2ms 0.014% 38.55% 1258ms 8.55% H5F_block_write 2ms 0.014% 38.56% 1256ms 8.53% H5FD_write 0 0% 38.56% 1256ms 8.53% H5F__accum_write 0 0% 38.56% 1256ms 8.53% H5PB_write 2ms 0.014% 38.57% 1171ms 7.95% H5D__mpio_select_write 3ms 0.02% 38.60% 1121ms 7.61% H5D__chunk_cacheable 2ms 0.014% 38.61% 1057ms 7.18% PMPI_File_write_at_all 1021ms 6.94% 45.54% 1024ms 6.96% __GI_pwritev64 375ms 2.55% 48.09% 933ms 6.34% H5S_select_iterate 11ms 0.075% 48.17% 862ms 5.86% std::pow (inline) 83ms 0.56% 48.73% 851ms 5.78% __pow 1ms 0.0068% 48.74% 766ms 5.20% PCApply 100ms 0.68% 49.42% 766ms 5.20% __ieee754_pow_fma 3ms 0.02% 49.44% 765ms 5.20% PCApply_BJacobi_Singleblock 370ms 2.51% 51.95% 762ms 5.18% MonodomainSolver::SetupLinearSystem 0 0% 51.95% 718ms 4.88% KSPSolve_PREONLY 1ms 0.0068% 51.96% 714ms 4.85% PCApply_ICC 0 0% 51.96% 713ms 4.84% MatSolve 694ms 4.71% 56.67% 713ms 4.84% MatSolve_SeqSBAIJ_1_NaturalOrdering 403ms 2.74% 59.41% 700ms 4.75% CellLuoRudy1991FromCellML::VerifyStateVariables 52ms 0.35% 59.76% 585ms 3.97% H5D__chunk_set_sizes 6ms 0.041% 59.80% 531ms 3.61% MatMult 521ms 3.54% 63.34% 525ms 3.57% MatMult_SeqAIJ 1ms 0.0068% 63.35% 503ms 3.42% KSP_PCApply.lto_priv.7 48ms 0.33% 63.67% 430ms 2.92% H5S_mpio_space_type 373ms 2.53% 66.21% 373ms 2.53% log_inline (inline) 3ms 0.02% 66.23% 365ms 2.48% KSPConvergedDefault 267ms 1.81% 68.04% 273ms 1.85% exp_inline (inline) 0 0% 68.04% 267ms 1.81% KSP_PCApply 135ms 0.92% 68.96% 249ms 1.69% TimeStepper::TimeStepper 152ms 1.03% 69.99% 196ms 1.33% AbstractOneStepIvpOdeSolver::Solve 195ms 1.32% 71.32% 195ms 1.32% [libchaste_heart.so] 15ms 0.1% 71.42% 187ms 1.27% H5VM_chunk_index 13ms 0.088% 71.51% 180ms 1.22% ompi_datatype_destroy 10ms 0.068% 71.57% 178ms 1.21% MPI_Type_free 33ms 0.22% 71.80% 178ms 1.21% __GI___libc_malloc 36ms 0.24% 72.04% 176ms 1.20% __GI___libc_free 92ms 0.62% 72.67% 173ms 1.18% top12 (inline) 131ms 0.89% 73.56% 170ms 1.15% _int_malloc 162ms 1.10% 74.66% 162ms 1.10% ddot_ 2ms 0.014% 74.67% 161ms 1.09% Hdf5DataWriter::PutUnlimitedVariable 71ms 0.48% 75.15% 155ms 1.05% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 8ms 0.054% 75.21% 154ms 1.05% ompi_info_register_framework_params 127ms 0.86% 76.07% 153ms 1.04% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 31ms 0.21% 76.28% 151ms 1.03% ompi_datatype_release_args 8ms 0.054% 76.33% 142ms 0.96% ompi_datatype_create 63ms 0.43% 76.76% 140ms 0.95% _int_free 132ms 0.9% 77.66% 132ms 0.9% TimeStepper::CalculateNextTime 1ms 0.0068% 77.67% 130ms 0.88% PMPI_File_set_view 12ms 0.082% 77.75% 127ms 0.86% H5S_set_version 122ms 0.83% 78.58% 122ms 0.83% __memcpy_avx_unaligned_erms 29ms 0.2% 78.77% 120ms 0.82% AbstractCardiacCell::SetVoltage (partial-inline) 2ms 0.014% 78.79% 118ms 0.8% VecDuplicate 6ms 0.041% 78.83% 116ms 0.79% VecDuplicate_MPI 46ms 0.31% 79.14% 115ms 0.78% H5VM_array_calc 3ms 0.02% 79.16% 111ms 0.75% PMPI_Type_create_resized 32ms 0.22% 79.38% 110ms 0.75% std::__cxx11::basic_string::basic_string 110ms 0.75% 80.12% 110ms 0.75% std::isinf (inline) 104ms 0.71% 80.83% 104ms 0.71% __ieee754_log_fma 101ms 0.69% 81.52% 101ms 0.69% H5VM_chunk_index_scaled 2ms 0.014% 81.53% 101ms 0.69% VecNorm 47ms 0.32% 81.85% 98ms 0.67% H5S_hyper_add_span_element 1ms 0.0068% 81.86% 98ms 0.67% ompi_datatype_duplicate 72ms 0.49% 82.35% 95ms 0.65% AbstractParameterisedSystem::GetAnyVariable 2ms 0.014% 82.36% 95ms 0.65% VecTDot 0 0% 82.36% 94ms 0.64% VecNorm_Seq 2ms 0.014% 82.37% 92ms 0.62% VecTDot_Seq 0 0% 82.37% 90ms 0.61% VecXDot_Seq_Private.constprop.0 1ms 0.0068% 82.38% 85ms 0.58% H5Pcreate 77ms 0.52% 82.90% 84ms 0.57% AbstractParameterisedSystem::SetAnyVariable 84ms 0.57% 83.47% 84ms 0.57% [libm.so.6] 84ms 0.57% 84.04% 84ms 0.57% asuint64 (inline) 5ms 0.034% 84.08% 82ms 0.56% H5P_create_id 28ms 0.19% 84.27% 80ms 0.54% H5S__hyper_rebuild 37ms 0.25% 84.52% 79ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 47ms 0.32% 84.84% 78ms 0.53% TimeStepper::AdvanceOneTimeStep