File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 381ms, 87.79% of 434ms total Dropped 172 nodes (cum <= 2.17ms) flat flat% sum% cum cum% 0 0% 0% 427ms 98.39% __libc_start_call_main 0 0% 0% 427ms 98.39% __libc_start_main_impl 0 0% 0% 427ms 98.39% _start 0 0% 0% 424ms 97.70% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 424ms 97.70% CxxTest::TestRunner::runAllTests 0 0% 0% 424ms 97.70% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 424ms 97.70% main 0 0% 0% 393ms 90.55% CxxTest::RealTestDescription::run 0 0% 0% 393ms 90.55% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 393ms 90.55% CxxTest::TestRunner::runTest (inline) 0 0% 0% 393ms 90.55% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 393ms 90.55% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 389ms 89.63% AbstractCardiacProblem::Solve 0 0% 0% 388ms 89.40% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 354ms 81.57% KSPSolve 0 0% 0% 354ms 81.57% KSPSolve_Private 0 0% 0% 354ms 81.57% LinearSystem::Solve 0 0% 0% 353ms 81.34% KSPSolve_CG 0 0% 0% 207ms 47.70% KSP_PCApply.lto_priv.7 0 0% 0% 201ms 46.31% PCApply 0 0% 0% 200ms 46.08% PCApply_BJacobi_Singleblock 0 0% 0% 175ms 40.32% KSPSolve_PREONLY (partial-inline) 1ms 0.23% 0.23% 166ms 38.25% MatSolve 0 0% 0.23% 166ms 38.25% PCApply_ICC 161ms 37.10% 37.33% 165ms 38.02% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.23% 37.56% 66ms 15.21% MatMult 8ms 1.84% 39.40% 65ms 14.98% MatMult_SeqAIJ (partial-inline) 57ms 13.13% 52.53% 65ms 14.98% MatMult_SeqAIJ_Inode (inline) 44ms 10.14% 62.67% 44ms 10.14% ddot_ 1ms 0.23% 62.90% 31ms 7.14% AbstractCardiacTissue::SolveCellSystems 0 0% 62.90% 31ms 7.14% VecTDot 0 0% 62.90% 31ms 7.14% VecTDot_Seq 0 0% 62.90% 31ms 7.14% VecXDot_Seq_Private.constprop.0 0 0% 62.90% 28ms 6.45% CxxTest::RealWorldDescription::setUp 0 0% 62.90% 28ms 6.45% PMPI_Init_thread 0 0% 62.90% 28ms 6.45% PetscInitialize 0 0% 62.90% 28ms 6.45% PetscSetup::setUpWorld 0 0% 62.90% 28ms 6.45% PetscSetupUtils::CommonSetup 0 0% 62.90% 28ms 6.45% PetscSetupUtils::InitialisePetsc 0 0% 62.90% 28ms 6.45% ompi_mpi_init 0 0% 62.90% 27ms 6.22% MatNullSpaceRemove 0 0% 62.90% 24ms 5.53% 0 0% 62.90% 21ms 4.84% orte_init 0 0% 62.90% 20ms 4.61% VecAYPX 20ms 4.61% 67.51% 20ms 4.61% VecAYPX_Seq 0 0% 67.51% 17ms 3.92% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.23% 67.74% 16ms 3.69% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 67.74% 15ms 3.46% KSP_PCApply (partial-inline) 0 0% 67.74% 15ms 3.46% VecMDot 15ms 3.46% 71.20% 15ms 3.46% VecMDot_Seq 0 0% 71.20% 15ms 3.46% VecMXDot_Private 0 0% 71.20% 13ms 3.00% VecNorm 0 0% 71.20% 13ms 3.00% VecNorm_Seq 0 0% 71.20% 13ms 3.00% hwloc_topology_load 3ms 0.69% 71.89% 12ms 2.76% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 71.89% 12ms 2.76% EulerIvpOdeSolver::CalculateNextYValue 0 0% 71.89% 12ms 2.76% VecMAXPY 12ms 2.76% 74.65% 12ms 2.76% VecMAXPY_Seq 10ms 2.30% 76.96% 12ms 2.76% __GI___exp 0 0% 76.96% 12ms 2.76% hwloc_linux_get_tid_last_cpu_location 0 0% 76.96% 11ms 2.53% __GI__dl_catch_exception 0 0% 76.96% 11ms 2.53% _dl_catch_error 0 0% 76.96% 11ms 2.53% _dlerror_run 0 0% 76.96% 11ms 2.53% mca_base_framework_open 0 0% 76.96% 11ms 2.53% opal_stackframe_output 0 0% 76.96% 10ms 2.30% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 76.96% 10ms 2.30% VecAXPY 0 0% 76.96% 10ms 2.30% VecAXPY_Seq 10ms 2.30% 79.26% 10ms 2.30% daxpy_ 0 0% 79.26% 10ms 2.30% mca_base_framework_components_register 0 0% 79.26% 10ms 2.30% mca_base_framework_register 3ms 0.69% 79.95% 9ms 2.07% CellLuoRudy1991FromCellML::GetIIonic 0 0% 79.95% 9ms 2.07% PetscMemcpy (inline) 0 0% 79.95% 9ms 2.07% VecDuplicate 0 0% 79.95% 9ms 2.07% VecDuplicate_Seq 0 0% 79.95% 7ms 1.61% ___dlopen 7ms 1.61% 81.57% 7ms 1.61% __memcpy_avx_unaligned_erms 0 0% 81.57% 7ms 1.61% _dl_init 0 0% 81.57% 7ms 1.61% _dl_start_user 0 0% 81.57% 7ms 1.61% call_init (inline) 1ms 0.23% 81.80% 7ms 1.61% dlopen_doit 0 0% 81.80% 7ms 1.61% dlopen_implementation (inline) 0 0% 81.80% 7ms 1.61% mca_base_component_find 0 0% 81.80% 7ms 1.61% mca_base_component_repository_open 0 0% 81.80% 6ms 1.38% KSPConvergedDefault 0 0% 81.80% 6ms 1.38% VecSetType 0 0% 81.80% 6ms 1.38% _dl_open 0 0% 81.80% 6ms 1.38% dl_open_worker 0 0% 81.80% 6ms 1.38% dl_open_worker_begin 0 0% 81.80% 5ms 1.15% VecCreate_Seq 1ms 0.23% 82.03% 5ms 1.15% VecCreate_Seq_Private (partial-inline) 5ms 1.15% 83.18% 5ms 1.15% __GI___libc_read 0 0% 83.18% 5ms 1.15% _dl_map_object 0 0% 83.18% 5ms 1.15% opal_hwloc_base_get_topology 0 0% 83.18% 5ms 1.15% orte_ess_base_proc_binding 0 0% 83.18% 4ms 0.92% PetscMallocA 0 0% 83.18% 4ms 0.92% PetscMallocAlign 1ms 0.23% 83.41% 4ms 0.92% VecCopy 0 0% 83.41% 4ms 0.92% VecDestroy 1ms 0.23% 83.64% 4ms 0.92% __GI___libc_malloc 0 0% 83.64% 4ms 0.92% __dlclose 0 0% 83.64% 4ms 0.92% __posix_memalign 0 0% 83.64% 4ms 0.92% _dl_close 1ms 0.23% 83.87% 4ms 0.92% _dl_close_worker (inline) 1ms 0.23% 84.10% 4ms 0.92% _dl_map_object_from_fd 0 0% 84.10% 4ms 0.92% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.23% 84.33% 4ms 0.92% boost::serialization::singleton::get_instance 0 0% 84.33% 4ms 0.92% mca_base_component_repository_release 0 0% 84.33% 3ms 0.69% AbstractCardiacProblem::Initialise 0 0% 84.33% 3ms 0.69% BidomainSolver::SetupLinearSystem 0 0% 84.33% 3ms 0.69% CxxTest::RealWorldDescription::tearDown 0 0% 84.33% 3ms 0.69% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.33% 3ms 0.69% PetscFinalize 1ms 0.23% 84.56% 3ms 0.69% PetscHeaderDestroy_Private 0 0% 84.56% 3ms 0.69% PetscSetup::tearDownWorld 0 0% 84.56% 3ms 0.69% PetscSetupUtils::CommonFinalize 0 0% 84.56% 3ms 0.69% TrianglesMeshReader::GetNextItemFromStream 0 0% 84.56% 3ms 0.69% VecCopy_Seq (partial-inline) 0 0% 84.56% 3ms 0.69% VecCreate 0 0% 84.56% 3ms 0.69% __GI_exit 3ms 0.69% 85.25% 3ms 0.69% __GI_munmap 0 0% 85.25% 3ms 0.69% __cxa_finalize 3ms 0.69% 85.94% 3ms 0.69% __libc_openat64 0 0% 85.94% 3ms 0.69% __run_exit_handlers 0 0% 85.94% 3ms 0.69% _dl_call_fini 0 0% 85.94% 3ms 0.69% _dl_fini 1ms 0.23% 86.18% 3ms 0.69% _dl_fixup 0 0% 86.18% 3ms 0.69% _dl_lookup_symbol_x 0 0% 86.18% 3ms 0.69% _dl_runtime_resolve_xsavec 0 0% 86.18% 3ms 0.69% _dl_unmap 0 0% 86.18% 3ms 0.69% _dl_unmap_segments (inline) 2ms 0.46% 86.64% 3ms 0.69% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.64% 3ms 0.69% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.64% 3ms 0.69% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 2ms 0.46% 87.10% 3ms 0.69% do_lookup_x 3ms 0.69% 87.79% 3ms 0.69% malloc_consolidate 0 0% 87.79% 3ms 0.69% mca_base_component_var_register 0 0% 87.79% 3ms 0.69% mca_base_components_close 0 0% 87.79% 3ms 0.69% mca_base_var_group_register 0 0% 87.79% 3ms 0.69% mca_base_var_register 0 0% 87.79% 3ms 0.69% ompi_mpi_finalize