File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108860ms, 91.77% of 118629ms total Dropped 1127 nodes (cum <= 593.14ms) flat flat% sum% cum cum% 0 0% 0% 118612ms 100% __libc_start_call_main 0 0% 0% 118612ms 100% __libc_start_main_impl 0 0% 0% 118612ms 100% _start 0 0% 0% 118609ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118609ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118609ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118609ms 100% main 0 0% 0% 118576ms 100% AbstractConvergenceTester::Converge 0 0% 0% 118576ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118576ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118576ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118576ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118576ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0034% 0.0034% 117334ms 98.91% AbstractCardiacProblem::Solve 5ms 0.0042% 0.0076% 116630ms 98.31% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0025% 0.01% 65114ms 54.89% LinearSystem::Solve 2ms 0.0017% 0.012% 64652ms 54.50% KSPSolve 11ms 0.0093% 0.021% 64650ms 54.50% KSPSolve_Private 9ms 0.0076% 0.029% 64231ms 54.14% KSPSolve_SYMMLQ 221ms 0.19% 0.21% 42774ms 36.06% AbstractCardiacTissue::SolveCellSystems 7ms 0.0059% 0.22% 36797ms 31.02% PCApply 7ms 0.0059% 0.23% 36788ms 31.01% PCApply_BJacobi_Singleblock 3ms 0.0025% 0.23% 34316ms 28.93% KSPSolve_PREONLY (partial-inline) 1ms 0.00084% 0.23% 33223ms 28.01% PCApply_ICC 4ms 0.0034% 0.23% 33222ms 28.00% MatSolve 32737ms 27.60% 27.83% 33218ms 28.00% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1414ms 1.19% 29.02% 32895ms 27.73% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 29.02% 31723ms 26.74% KSP_PCApply.lto_priv.18 6879ms 5.80% 34.82% 28420ms 23.96% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0067% 34.83% 21865ms 18.43% MatMult 36ms 0.03% 34.86% 21857ms 18.42% MatMult_SeqAIJ 21336ms 17.99% 52.84% 21826ms 18.40% MatMult_SeqAIJ_Inode (inline) 1999ms 1.69% 54.53% 14661ms 12.36% CardiacNewtonSolver::Solve 411ms 0.35% 54.87% 9041ms 7.62% AbstractCardiacTissue::UpdateCaches (inline) 4402ms 3.71% 58.59% 8500ms 7.17% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1999ms 1.69% 60.27% 8440ms 7.11% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1165ms 0.98% 61.25% 7750ms 6.53% BidomainSolver::SetupLinearSystem 1271ms 1.07% 62.32% 7689ms 6.48% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 62.32% 7049ms 5.94% KSP_PCApply (partial-inline) 4ms 0.0034% 62.33% 6507ms 5.49% KSPConvergedDefault 6134ms 5.17% 67.50% 6134ms 5.17% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3788ms 3.19% 70.69% 3838ms 3.24% __ieee754_log_fma 0 0% 70.69% 3747ms 3.16% boost::numeric::ublas::norm_inf (inline) 2548ms 2.15% 72.84% 3747ms 3.16% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.84% 3747ms 3.16% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.84% 3747ms 3.16% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0059% 72.84% 3308ms 2.79% MatNullSpaceRemove 18ms 0.015% 72.86% 3169ms 2.67% std::pow (inline) 443ms 0.37% 73.23% 3139ms 2.65% __pow 2956ms 2.49% 75.73% 2956ms 2.49% __memcpy_avx_unaligned_erms 0 0% 75.73% 2918ms 2.46% PetscMemcpy (inline) 1744ms 1.47% 77.20% 2895ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 357ms 0.3% 77.50% 2689ms 2.27% __ieee754_pow_fma 2626ms 2.21% 79.71% 2626ms 2.21% ddot_ 17ms 0.014% 79.72% 2473ms 2.08% VecAXPY 25ms 0.021% 79.75% 2467ms 2.08% VecCopy 3ms 0.0025% 79.75% 2456ms 2.07% VecAXPY_Seq 1ms 0.00084% 79.75% 2440ms 2.06% VecCopy_Seq (partial-inline) 2440ms 2.06% 81.81% 2440ms 2.06% daxpy_ 2ms 0.0017% 81.81% 2107ms 1.78% VecDot 1ms 0.00084% 81.81% 2105ms 1.77% VecDot_Seq 1ms 0.00084% 81.81% 2104ms 1.77% VecXDot_Seq_Private.constprop.0 0 0% 81.81% 2053ms 1.73% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.81% 1884ms 1.59% VecMDot 5ms 0.0042% 81.81% 1884ms 1.59% VecMXDot_Private 1873ms 1.58% 83.39% 1879ms 1.58% VecMDot_Seq 30ms 0.025% 83.42% 1742ms 1.47% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1530ms 1.29% 84.71% 1593ms 1.34% exp_inline (inline) 0 0% 84.71% 1418ms 1.20% AbstractFeAssemblerInterface::AssembleMatrix (inline) 4ms 0.0034% 84.71% 1417ms 1.19% VecMAXPY 1401ms 1.18% 85.89% 1413ms 1.19% VecMAXPY_Seq 1154ms 0.97% 86.86% 1154ms 0.97% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1108ms 0.93% 87.80% 1108ms 0.93% __memset_avx2_unaligned_erms 5ms 0.0042% 87.80% 1108ms 0.93% boost::numeric::ublas::matrix_assign (inline) 225ms 0.19% 87.99% 1102ms 0.93% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.99% 1101ms 0.93% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.99% 1101ms 0.93% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.99% 1101ms 0.93% boost_numeric_ublas_abs (inline) 1101ms 0.93% 88.92% 1101ms 0.93% std::abs (inline) 0 0% 88.92% 1096ms 0.92% PetscMemzero (inline) 0 0% 88.92% 1090ms 0.92% CuboidMeshConstructor::Construct 0 0% 88.92% 1089ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.92% 1089ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 813ms 0.69% 89.61% 1062ms 0.9% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00084% 89.61% 1000ms 0.84% Element::Element 5ms 0.0042% 89.61% 993ms 0.84% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.61% 944ms 0.8% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 89.61% 906ms 0.76% VecDuplicate 3ms 0.0025% 89.61% 881ms 0.74% BidomainAssembler::ComputeMatrixTerm 832ms 0.7% 90.32% 832ms 0.7% [libchaste_heart.so] 10ms 0.0084% 90.32% 825ms 0.7% VecScale 5ms 0.0042% 90.33% 815ms 0.69% VecScale_Seq 3ms 0.0025% 90.33% 810ms 0.68% boost::numeric::ublas::c_matrix::c_matrix (inline) 805ms 0.68% 91.01% 805ms 0.68% dscal_ 11ms 0.0093% 91.02% 779ms 0.66% PetscMallocA 0 0% 91.02% 770ms 0.65% VecNorm 8ms 0.0067% 91.03% 768ms 0.65% PetscMallocAlign (partial-inline) 2ms 0.0017% 91.03% 761ms 0.64% VecNorm_Seq 0 0% 91.03% 699ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 182ms 0.15% 91.18% 696ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 688ms 0.58% 91.76% 688ms 0.58% log_inline (inline) 5ms 0.0042% 91.77% 649ms 0.55% BidomainProblem::WriteOneStep 0 0% 91.77% 635ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)