File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12213ms, 85.53% of 14279ms total Dropped 760 nodes (cum <= 71.39ms) flat flat% sum% cum cum% 0 0% 0% 14271ms 99.94% __libc_start_call_main 0 0% 0% 14271ms 99.94% __libc_start_main_impl 0 0% 0% 14271ms 99.94% _start 0 0% 0% 14268ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14268ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14268ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14268ms 99.92% main 0 0% 0% 14233ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14233ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14233ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14212ms 99.53% AbstractCardiacProblem::Solve 4ms 0.028% 0.028% 11246ms 78.76% AbstractDynamicLinearPdeSolver::Solve 40ms 0.28% 0.31% 8766ms 61.39% AbstractCardiacTissue::SolveCellSystems 88ms 0.62% 0.92% 5474ms 38.34% AbstractCardiacCell::ComputeExceptVoltage 81ms 0.57% 1.49% 4805ms 33.65% AbstractOneStepIvpOdeSolver::InternalSolve 149ms 1.04% 2.54% 4173ms 29.22% EulerIvpOdeSolver::CalculateNextYValue 933ms 6.53% 9.07% 3974ms 27.83% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1706ms 11.95% 21.02% 3604ms 25.24% __GI___exp 0 0% 21.02% 2902ms 20.32% MonodomainProblem::WriteOneStep 4ms 0.028% 21.04% 2762ms 19.34% Hdf5DataWriter::PutVector 0 0% 21.04% 2754ms 19.29% H5Dwrite 5ms 0.035% 21.08% 2727ms 19.10% H5D__write 75ms 0.53% 21.61% 2538ms 17.77% AbstractCardiacTissue::UpdateCaches (inline) 735ms 5.15% 26.75% 2430ms 17.02% CellLuoRudy1991FromCellML::GetIIonic 1646ms 11.53% 38.28% 1816ms 12.72% __ieee754_exp_fma 3ms 0.021% 38.30% 1780ms 12.47% LinearSystem::Solve 1ms 0.007% 38.31% 1774ms 12.42% H5D__chunk_collective_write 13ms 0.091% 38.40% 1773ms 12.42% H5F_set_coll_metadata_reads 0 0% 38.40% 1659ms 11.62% KSPSolve 8ms 0.056% 38.46% 1659ms 11.62% KSPSolve_Private 4ms 0.028% 38.48% 1632ms 11.43% KSPSolve_CG 15ms 0.11% 38.59% 1557ms 10.90% H5FD_s3comms_uriencode 4ms 0.028% 38.62% 1204ms 8.43% H5F_block_write 1ms 0.007% 38.62% 1200ms 8.40% H5PB_write 2ms 0.014% 38.64% 1199ms 8.40% H5F__accum_write 2ms 0.014% 38.65% 1197ms 8.38% H5FD_write 39ms 0.27% 38.92% 1195ms 8.37% 1ms 0.007% 38.93% 1110ms 7.77% H5D__mpio_select_write 0 0% 38.93% 1022ms 7.16% PMPI_File_write_at_all 994ms 6.96% 45.89% 997ms 6.98% __GI_pwritev64 2ms 0.014% 45.91% 909ms 6.37% PCApply 0 0% 45.91% 907ms 6.35% PCApply_BJacobi_Singleblock 7ms 0.049% 45.96% 894ms 6.26% std::pow (inline) 81ms 0.57% 46.52% 887ms 6.21% __pow 4ms 0.028% 46.55% 858ms 6.01% KSPSolve_PREONLY 13ms 0.091% 46.64% 845ms 5.92% H5D__chunk_cacheable 2ms 0.014% 46.66% 845ms 5.92% PCApply_ICC 1ms 0.007% 46.66% 843ms 5.90% MatSolve 829ms 5.81% 52.47% 842ms 5.90% MatSolve_SeqSBAIJ_1_NaturalOrdering 101ms 0.71% 53.18% 804ms 5.63% __ieee754_pow_fma 280ms 1.96% 55.14% 701ms 4.91% H5S_select_iterate 287ms 2.01% 57.15% 677ms 4.74% MonodomainSolver::SetupLinearSystem 2ms 0.014% 57.16% 655ms 4.59% KSP_PCApply.lto_priv.7 1ms 0.007% 57.17% 608ms 4.26% MatMult 605ms 4.24% 61.40% 607ms 4.25% MatMult_SeqAIJ 277ms 1.94% 63.34% 550ms 3.85% CellLuoRudy1991FromCellML::VerifyStateVariables 49ms 0.34% 63.69% 437ms 3.06% H5D__chunk_set_sizes 43ms 0.3% 63.99% 433ms 3.03% H5S_mpio_space_type 388ms 2.72% 66.71% 388ms 2.72% log_inline (inline) 6ms 0.042% 66.75% 347ms 2.43% KSPConvergedDefault 279ms 1.95% 68.70% 288ms 2.02% exp_inline (inline) 127ms 0.89% 69.59% 264ms 1.85% TimeStepper::TimeStepper 0 0% 69.59% 258ms 1.81% KSP_PCApply 117ms 0.82% 70.41% 205ms 1.44% top12 (inline) 91ms 0.64% 71.05% 202ms 1.41% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 202ms 1.41% 72.46% 202ms 1.41% [libchaste_heart.so] 10ms 0.07% 72.53% 188ms 1.32% ompi_datatype_destroy 40ms 0.28% 72.81% 186ms 1.30% __GI___libc_malloc 32ms 0.22% 73.04% 184ms 1.29% __GI___libc_free 7ms 0.049% 73.09% 183ms 1.28% MPI_Type_free 172ms 1.20% 74.29% 172ms 1.20% ddot_ 141ms 0.99% 75.28% 167ms 1.17% _int_malloc 8ms 0.056% 75.33% 159ms 1.11% ompi_info_register_framework_params 43ms 0.3% 75.64% 158ms 1.11% ompi_datatype_release_args 152ms 1.06% 76.70% 152ms 1.06% TimeStepper::CalculateNextTime 63ms 0.44% 77.14% 152ms 1.06% _int_free 7ms 0.049% 77.19% 151ms 1.06% ompi_datatype_create 128ms 0.9% 78.09% 150ms 1.05% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 125ms 0.88% 78.96% 145ms 1.02% AbstractOneStepIvpOdeSolver::Solve 0 0% 78.96% 140ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 12ms 0.084% 79.05% 131ms 0.92% H5VM_chunk_index 30ms 0.21% 79.26% 125ms 0.88% AbstractCardiacCell::SetVoltage (partial-inline) 5ms 0.035% 79.29% 114ms 0.8% VecNorm 48ms 0.34% 79.63% 111ms 0.78% std::__cxx11::basic_string::basic_string 1ms 0.007% 79.63% 107ms 0.75% VecDuplicate 2ms 0.014% 79.65% 106ms 0.74% VecDuplicate_MPI 105ms 0.74% 80.38% 105ms 0.74% __ieee754_log_fma 103ms 0.72% 81.11% 103ms 0.72% std::isinf (inline) 69ms 0.48% 81.59% 100ms 0.7% AbstractCardiacCell::GetVoltage (partial-inline) 2ms 0.014% 81.60% 100ms 0.7% VecNorm_Seq 2ms 0.014% 81.62% 100ms 0.7% VecTDot 0 0% 81.62% 98ms 0.69% VecTDot_Seq 2ms 0.014% 81.63% 98ms 0.69% VecXDot_Seq_Private.constprop.0 0 0% 81.63% 97ms 0.68% PMPI_File_set_view 51ms 0.36% 81.99% 96ms 0.67% H5S_hyper_add_span_element 3ms 0.021% 82.01% 90ms 0.63% ompi_datatype_duplicate 56ms 0.39% 82.40% 89ms 0.62% TimeStepper::AdvanceOneTimeStep 89ms 0.62% 83.02% 89ms 0.62% __memcpy_avx_unaligned_erms 89ms 0.62% 83.65% 89ms 0.62% asuint64 (inline) 0 0% 83.65% 86ms 0.6% PMPI_Type_create_resized 85ms 0.6% 84.24% 85ms 0.6% [libm.so.6] 2ms 0.014% 84.26% 83ms 0.58% MPI_Type_contiguous 69ms 0.48% 84.74% 82ms 0.57% AbstractParameterisedSystem::SetAnyVariable 61ms 0.43% 85.17% 79ms 0.55% AbstractParameterisedSystem::GetAnyVariable 14ms 0.098% 85.27% 79ms 0.55% H5S_set_version 1ms 0.007% 85.27% 73ms 0.51% H5D__chunk_allocated 28ms 0.2% 85.47% 73ms 0.51% __libc_calloc 9ms 0.063% 85.53% 72ms 0.5% opal_dss_print_buffer_contents