File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 123661ms, 91.10% of 135741ms total Dropped 1174 nodes (cum <= 678.71ms) flat flat% sum% cum cum% 0 0% 0% 135724ms 100% __libc_start_call_main 0 0% 0% 135724ms 100% __libc_start_main_impl 0 0% 0% 135724ms 100% _start 0 0% 0% 135721ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 135721ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 135721ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 135721ms 100% main 0 0% 0% 135682ms 100% AbstractConvergenceTester::Converge 0 0% 0% 135682ms 100% CxxTest::RealTestDescription::run 0 0% 0% 135682ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 135682ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 135682ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 135682ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0015% 0.0015% 134496ms 99.08% AbstractCardiacProblem::Solve 6ms 0.0044% 0.0059% 133713ms 98.51% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0022% 0.0081% 72688ms 53.55% LinearSystem::Solve 3ms 0.0022% 0.01% 72149ms 53.15% KSPSolve 12ms 0.0088% 0.019% 72146ms 53.15% KSPSolve_Private 13ms 0.0096% 0.029% 71735ms 52.85% KSPSolve_SYMMLQ 611ms 0.45% 0.48% 51559ms 37.98% AbstractCardiacTissue::SolveCellSystems 2ms 0.0015% 0.48% 40257ms 29.66% PCApply 6ms 0.0044% 0.48% 40246ms 29.65% PCApply_BJacobi_Singleblock 1538ms 1.13% 1.62% 39639ms 29.20% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 1.62% 37750ms 27.81% KSPSolve_PREONLY (partial-inline) 2ms 0.0015% 1.62% 36624ms 26.98% PCApply_ICC 11ms 0.0081% 1.63% 36622ms 26.98% MatSolve 36185ms 26.66% 28.28% 36611ms 26.97% MatSolve_SeqSBAIJ_1_NaturalOrdering 7559ms 5.57% 33.85% 34818ms 25.65% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 2ms 0.0015% 33.85% 34302ms 25.27% KSP_PCApply.lto_priv.18 9ms 0.0066% 33.86% 25352ms 18.68% MatMult 297ms 0.22% 34.08% 25343ms 18.67% MatMult_SeqAIJ (partial-inline) 24824ms 18.29% 52.37% 25339ms 18.67% MatMult_SeqAIJ_Inode (inline) 2269ms 1.67% 54.04% 17369ms 12.80% CardiacNewtonSolver::Solve 1298ms 0.96% 55.00% 11375ms 8.38% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 6027ms 4.44% 59.44% 10578ms 7.79% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 550ms 0.41% 59.84% 10120ms 7.46% AbstractCardiacTissue::UpdateCaches (inline) 9790ms 7.21% 67.05% 9790ms 7.21% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1701ms 1.25% 68.31% 8494ms 6.26% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1261ms 0.93% 69.24% 8320ms 6.13% BidomainSolver::SetupLinearSystem 2ms 0.0015% 69.24% 7761ms 5.72% KSP_PCApply (partial-inline) 6ms 0.0044% 69.24% 7222ms 5.32% KSPConvergedDefault 4320ms 3.18% 72.42% 4409ms 3.25% __ieee754_log_fma 0 0% 72.42% 4051ms 2.98% boost::numeric::ublas::norm_inf (inline) 2830ms 2.08% 74.51% 4051ms 2.98% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.51% 4051ms 2.98% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.51% 4051ms 2.98% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3552ms 2.62% 77.13% 3552ms 2.62% ddot_ 6ms 0.0044% 77.13% 3316ms 2.44% MatNullSpaceRemove 42ms 0.031% 77.16% 3295ms 2.43% std::pow (inline) 449ms 0.33% 77.49% 3239ms 2.39% __pow 2047ms 1.51% 79.00% 3100ms 2.28% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3038ms 2.24% 81.24% 3038ms 2.24% __memcpy_avx_unaligned_erms 0 0% 81.24% 3015ms 2.22% PetscMemcpy (inline) 4ms 0.0029% 81.24% 2987ms 2.20% VecDot 1ms 0.00074% 81.24% 2983ms 2.20% VecDot_Seq 2ms 0.0015% 81.24% 2982ms 2.20% VecXDot_Seq_Private.constprop.0 364ms 0.27% 81.51% 2755ms 2.03% __ieee754_pow_fma 15ms 0.011% 81.52% 2611ms 1.92% VecCopy 2ms 0.0015% 81.52% 2593ms 1.91% VecCopy_Seq (partial-inline) 14ms 0.01% 81.53% 2502ms 1.84% VecAXPY 6ms 0.0044% 81.54% 2488ms 1.83% VecAXPY_Seq 2467ms 1.82% 83.36% 2467ms 1.82% daxpy_ 2ms 0.0015% 83.36% 2145ms 1.58% VecMDot 12ms 0.0088% 83.37% 2143ms 1.58% VecMXDot_Private 2124ms 1.56% 84.93% 2128ms 1.57% VecMDot_Seq 3ms 0.0022% 84.93% 2047ms 1.51% AbstractFeVolumeIntegralAssembler::DoAssemble 41ms 0.03% 84.96% 1706ms 1.26% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1602ms 1.18% 86.14% 1668ms 1.23% exp_inline (inline) 1519ms 1.12% 87.26% 1519ms 1.12% [libchaste_heart.so] 0 0% 87.26% 1398ms 1.03% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 87.26% 1212ms 0.89% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.26% 1212ms 0.89% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.26% 1212ms 0.89% boost_numeric_ublas_abs (inline) 1212ms 0.89% 88.16% 1212ms 0.89% std::abs (inline) 3ms 0.0022% 88.16% 1165ms 0.86% VecMAXPY 1155ms 0.85% 89.01% 1162ms 0.86% VecMAXPY_Seq 7ms 0.0052% 89.01% 1104ms 0.81% boost::numeric::ublas::matrix_assign (inline) 217ms 0.16% 89.17% 1087ms 0.8% boost::numeric::ublas::indexing_matrix_assign 703ms 0.52% 89.69% 1054ms 0.78% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.69% 1005ms 0.74% CuboidMeshConstructor::Construct 0 0% 89.69% 1004ms 0.74% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00074% 89.69% 1004ms 0.74% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.0029% 89.70% 906ms 0.67% Element::Element 2ms 0.0015% 89.70% 899ms 0.66% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0015% 89.70% 884ms 0.65% KSP_RemoveNullSpace (inline) 1ms 0.00074% 89.70% 881ms 0.65% VecNorm 4ms 0.0029% 89.70% 877ms 0.65% VecNorm_Seq 6ms 0.0044% 89.71% 871ms 0.64% BidomainAssembler::ComputeMatrixTerm 7ms 0.0052% 89.71% 851ms 0.63% boost::numeric::ublas::c_matrix::c_matrix (inline) 846ms 0.62% 90.33% 846ms 0.62% __memset_avx2_unaligned_erms 0 0% 90.33% 839ms 0.62% PetscMemzero (inline) 1ms 0.00074% 90.34% 837ms 0.62% AbstractTetrahedralElement::AbstractTetrahedralElement 8ms 0.0059% 90.34% 824ms 0.61% VecScale 4ms 0.0029% 90.34% 816ms 0.6% VecScale_Seq 805ms 0.59% 90.94% 805ms 0.59% dscal_ 2ms 0.0015% 90.94% 796ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 218ms 0.16% 91.10% 792ms 0.58% AbstractBidomainSolver::CheckCompatibilityCondition 1ms 0.00074% 91.10% 762ms 0.56% VecDuplicate 1ms 0.00074% 91.10% 721ms 0.53% BidomainProblem::WriteOneStep