File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12859ms, 85.96% of 14960ms total Dropped 748 nodes (cum <= 74.80ms) flat flat% sum% cum cum% 0 0% 0% 14950ms 99.93% __libc_start_call_main 0 0% 0% 14950ms 99.93% __libc_start_main_impl 0 0% 0% 14950ms 99.93% _start 0 0% 0% 14947ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14947ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14947ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14947ms 99.91% main 0 0% 0% 14908ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14908ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14908ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14885ms 99.50% AbstractCardiacProblem::Solve 3ms 0.02% 0.033% 11366ms 75.98% AbstractDynamicLinearPdeSolver::Solve 57ms 0.38% 0.41% 8957ms 59.87% AbstractCardiacTissue::SolveCellSystems 107ms 0.72% 1.13% 5397ms 36.08% AbstractCardiacCell::ComputeExceptVoltage 120ms 0.8% 1.93% 4683ms 31.30% AbstractOneStepIvpOdeSolver::InternalSolve 135ms 0.9% 2.83% 3982ms 26.62% EulerIvpOdeSolver::CalculateNextYValue 814ms 5.44% 8.28% 3805ms 25.43% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1831ms 12.24% 20.51% 3543ms 23.68% __GI___exp 4ms 0.027% 20.54% 3446ms 23.03% MonodomainProblem::WriteOneStep 0 0% 20.54% 3307ms 22.11% Hdf5DataWriter::PutVector 1ms 0.0067% 20.55% 3305ms 22.09% H5Dwrite 4ms 0.027% 20.57% 3279ms 21.92% H5D__write 140ms 0.94% 21.51% 2843ms 19.00% AbstractCardiacTissue::UpdateCaches (inline) 776ms 5.19% 26.70% 2611ms 17.45% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 26.71% 2020ms 13.50% H5D__chunk_collective_write 21ms 0.14% 26.85% 2018ms 13.49% H5F_set_coll_metadata_reads 20ms 0.13% 26.99% 1742ms 11.64% H5FD_s3comms_uriencode 1341ms 8.96% 35.95% 1654ms 11.06% __ieee754_exp_fma 1ms 0.0067% 35.96% 1598ms 10.68% LinearSystem::Solve 1ms 0.0067% 35.96% 1450ms 9.69% KSPSolve 5ms 0.033% 36.00% 1449ms 9.69% KSPSolve_Private 3ms 0.02% 36.02% 1430ms 9.56% KSPSolve_CG 49ms 0.33% 36.34% 1370ms 9.16% 1ms 0.0067% 36.35% 1366ms 9.13% H5F_block_write 4ms 0.027% 36.38% 1365ms 9.12% H5PB_write 2ms 0.013% 36.39% 1361ms 9.10% H5FD_write 0 0% 36.39% 1361ms 9.10% H5F__accum_write 3ms 0.02% 36.41% 1283ms 8.58% H5D__mpio_select_write 2ms 0.013% 36.42% 1162ms 7.77% PMPI_File_write_at_all 8ms 0.053% 36.48% 1148ms 7.67% H5D__chunk_cacheable 1132ms 7.57% 44.04% 1133ms 7.57% __GI_pwritev64 323ms 2.16% 46.20% 1003ms 6.70% H5S_select_iterate 8ms 0.053% 46.26% 961ms 6.42% std::pow (inline) 107ms 0.72% 46.97% 953ms 6.37% __pow 96ms 0.64% 47.61% 844ms 5.64% __ieee754_pow_fma 354ms 2.37% 49.98% 789ms 5.27% MonodomainSolver::SetupLinearSystem 0 0% 49.98% 784ms 5.24% PCApply 1ms 0.0067% 49.99% 781ms 5.22% PCApply_BJacobi_Singleblock 1ms 0.0067% 49.99% 748ms 5.00% KSPSolve_PREONLY 1ms 0.0067% 50.00% 744ms 4.97% PCApply_ICC 1ms 0.0067% 50.01% 743ms 4.97% MatSolve 735ms 4.91% 54.92% 742ms 4.96% MatSolve_SeqSBAIJ_1_NaturalOrdering 98ms 0.66% 55.57% 697ms 4.66% H5D__chunk_set_sizes 4ms 0.027% 55.60% 637ms 4.26% MatMult 630ms 4.21% 59.81% 633ms 4.23% MatMult_SeqAIJ 0 0% 59.81% 575ms 3.84% KSP_PCApply.lto_priv.7 69ms 0.46% 60.27% 480ms 3.21% H5S_mpio_space_type 217ms 1.45% 61.72% 478ms 3.20% CellLuoRudy1991FromCellML::VerifyStateVariables 449ms 3.00% 64.73% 449ms 3.00% log_inline (inline) 3ms 0.02% 64.75% 280ms 1.87% KSPConvergedDefault 103ms 0.69% 65.43% 267ms 1.78% TimeStepper::TimeStepper 258ms 1.72% 67.16% 265ms 1.77% exp_inline (inline) 192ms 1.28% 68.44% 241ms 1.61% top12 (inline) 240ms 1.60% 70.05% 240ms 1.60% [libchaste_heart.so] 6ms 0.04% 70.09% 211ms 1.41% H5VM_chunk_index 61ms 0.41% 70.49% 211ms 1.41% __GI___libc_malloc 0 0% 70.49% 210ms 1.40% KSP_PCApply 5ms 0.033% 70.53% 204ms 1.36% ompi_datatype_destroy 7ms 0.047% 70.57% 201ms 1.34% MPI_Type_free 164ms 1.10% 71.67% 201ms 1.34% _int_malloc 32ms 0.21% 71.89% 198ms 1.32% __GI___libc_free 9ms 0.06% 71.95% 188ms 1.26% ompi_datatype_create 8ms 0.053% 72.00% 183ms 1.22% ompi_info_register_framework_params 41ms 0.27% 72.27% 181ms 1.21% ompi_datatype_release_args 31ms 0.21% 72.48% 174ms 1.16% AbstractCardiacCell::SetVoltage (partial-inline) 68ms 0.45% 72.93% 166ms 1.11% _int_free 117ms 0.78% 73.72% 164ms 1.10% AbstractOneStepIvpOdeSolver::Solve 162ms 1.08% 74.80% 162ms 1.08% TimeStepper::CalculateNextTime 162ms 1.08% 75.88% 162ms 1.08% asuint64 (inline) 130ms 0.87% 76.75% 146ms 0.98% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 37ms 0.25% 77.00% 145ms 0.97% H5S_set_version 143ms 0.96% 77.95% 143ms 0.96% ddot_ 58ms 0.39% 78.34% 136ms 0.91% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 1ms 0.0067% 78.35% 135ms 0.9% Hdf5DataWriter::PutUnlimitedVariable 2ms 0.013% 78.36% 133ms 0.89% PMPI_File_set_view 131ms 0.88% 79.24% 131ms 0.88% __ieee754_log_fma 124ms 0.83% 80.07% 124ms 0.83% __memcpy_avx_unaligned_erms 102ms 0.68% 80.75% 120ms 0.8% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0067% 80.76% 119ms 0.8% VecDuplicate 14ms 0.094% 80.85% 118ms 0.79% VecDuplicate_MPI 91ms 0.61% 81.46% 116ms 0.78% AbstractParameterisedSystem::GetAnyVariable 112ms 0.75% 82.21% 112ms 0.75% H5VM_array_offset_pre 46ms 0.31% 82.51% 110ms 0.74% H5S_hyper_add_span_element 34ms 0.23% 82.74% 108ms 0.72% H5VM_array_calc 2ms 0.013% 82.75% 108ms 0.72% PMPI_Type_create_resized 0 0% 82.75% 106ms 0.71% VecNorm 2ms 0.013% 82.77% 102ms 0.68% VecNorm_Seq 29ms 0.19% 82.96% 99ms 0.66% __libc_calloc 96ms 0.64% 83.60% 96ms 0.64% H5VM_chunk_index_scaled 2ms 0.013% 83.62% 96ms 0.64% ompi_datatype_duplicate 54ms 0.36% 83.98% 94ms 0.63% TimeStepper::AdvanceOneTimeStep 92ms 0.61% 84.59% 92ms 0.61% std::isinf (inline) 31ms 0.21% 84.80% 91ms 0.61% AbstractCardiacCell::GetVoltage (partial-inline) 4ms 0.027% 84.83% 90ms 0.6% opal_datatype_create_desc 2ms 0.013% 84.84% 83ms 0.55% VecTDot 25ms 0.17% 85.01% 83ms 0.55% ompi_datatype_set_args 0 0% 85.01% 81ms 0.54% VecTDot_Seq 0 0% 85.01% 81ms 0.54% VecXDot_Seq_Private.constprop.0 47ms 0.31% 85.32% 80ms 0.53% H5S_select_iter_next 78ms 0.52% 85.84% 79ms 0.53% std::vector::operator[] (inline) 0 0% 85.84% 77ms 0.51% std::vector::_M_assign_aux (inline) 0 0% 85.84% 77ms 0.51% std::vector::assign (inline) 17ms 0.11% 85.96% 76ms 0.51% opal_dss_print_buffer_contents