File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 3646ms, 87.16% of 4183ms total Dropped 433 nodes (cum <= 20.91ms) flat flat% sum% cum cum% 0 0% 0% 4175ms 99.81% __libc_start_call_main 0 0% 0% 4175ms 99.81% __libc_start_main_impl 0 0% 0% 4175ms 99.81% _start 0 0% 0% 4172ms 99.74% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 4172ms 99.74% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 4172ms 99.74% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 4172ms 99.74% main 0 0% 0% 4136ms 98.88% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 4136ms 98.88% CxxTest::TestRunner::runTest (inline) 0 0% 0% 4136ms 98.88% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 4129ms 98.71% AbstractCardiacProblem::Solve 0 0% 0% 4118ms 98.45% AbstractDynamicLinearPdeSolver::Solve 11ms 0.26% 0.26% 2263ms 54.10% AbstractCardiacTissue::SolveCellSystems 0 0% 0.26% 1526ms 36.48% LinearSystem::Solve 0 0% 0.26% 1459ms 34.88% KSPSolve 8ms 0.19% 0.45% 1459ms 34.88% KSPSolve_Private 2ms 0.048% 0.5% 1416ms 33.85% KSPSolve_SYMMLQ 32ms 0.77% 1.27% 1283ms 30.67% AbstractCardiacCell::ComputeExceptVoltage 22ms 0.53% 1.79% 1094ms 26.15% AbstractOneStepIvpOdeSolver::InternalSolve 62ms 1.48% 3.28% 921ms 22.02% EulerIvpOdeSolver::CalculateNextYValue 3ms 0.072% 3.35% 870ms 20.80% PCApply 0 0% 3.35% 864ms 20.66% PCApply_BJacobi_Singleblock 284ms 6.79% 10.14% 846ms 20.22% CellLuoRudy1991FromCellML::EvaluateYDerivatives 352ms 8.42% 18.55% 742ms 17.74% __GI___exp 30ms 0.72% 19.27% 739ms 17.67% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 19.27% 707ms 16.90% KSPSolve_PREONLY (partial-inline) 247ms 5.90% 25.17% 687ms 16.42% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.048% 25.22% 666ms 15.92% PCApply_ICC 2ms 0.048% 25.27% 664ms 15.87% MatSolve 651ms 15.56% 40.83% 654ms 15.63% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 40.83% 651ms 15.56% KSP_PCApply.lto_priv.18 2ms 0.048% 40.88% 442ms 10.57% MatMult 181ms 4.33% 45.21% 429ms 10.26% MatMult_SeqAIJ 349ms 8.34% 53.55% 369ms 8.82% __ieee754_exp_fma 0 0% 53.55% 301ms 7.20% KSPConvergedDefault 0 0% 53.55% 284ms 6.79% KSP_PCApply (partial-inline) 50ms 1.20% 54.75% 277ms 6.62% BidomainSolver::SetupLinearSystem 242ms 5.79% 60.53% 251ms 6.00% MatMult_SeqAIJ_Inode (inline) 1ms 0.024% 60.55% 200ms 4.78% std::pow (inline) 26ms 0.62% 61.18% 199ms 4.76% __pow 73ms 1.75% 62.92% 186ms 4.45% CellLuoRudy1991FromCellML::VerifyStateVariables 21ms 0.5% 63.42% 173ms 4.14% __ieee754_pow_fma 1ms 0.024% 63.45% 119ms 2.84% MatNullSpaceRemove 0 0% 63.45% 109ms 2.61% VecDuplicate 26ms 0.62% 64.07% 103ms 2.46% MPI_Wtime 84ms 2.01% 66.08% 84ms 2.01% log_inline (inline) 17ms 0.41% 66.48% 77ms 1.84% PetscLogEventEndDefault 2ms 0.048% 66.53% 77ms 1.84% __GI___clock_gettime 75ms 1.79% 68.32% 75ms 1.79% [[vdso]] 35ms 0.84% 69.16% 71ms 1.70% TimeStepper::TimeStepper 66ms 1.58% 70.74% 66ms 1.58% exp_inline (inline) 11ms 0.26% 71.00% 64ms 1.53% PetscLogEventBeginDefault 0 0% 71.00% 64ms 1.53% VecMDot 4ms 0.096% 71.10% 64ms 1.53% VecMXDot_Private 63ms 1.51% 72.60% 63ms 1.51% ddot_ 11ms 0.26% 72.87% 63ms 1.51% std::__cxx11::basic_string::basic_string 3ms 0.072% 72.94% 59ms 1.41% VecDuplicate_MPI 0 0% 72.94% 56ms 1.34% VecNorm 3ms 0.072% 73.01% 54ms 1.29% VecMAXPY 7ms 0.17% 73.18% 53ms 1.27% VecCopy 6ms 0.14% 73.32% 50ms 1.20% PetscMallocA 4ms 0.096% 73.42% 50ms 1.20% VecCreate 2ms 0.048% 73.46% 50ms 1.20% VecDuplicate_Seq 13ms 0.31% 73.77% 47ms 1.12% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 73.77% 47ms 1.12% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 73.77% 47ms 1.12% VecDot 0 0% 73.77% 46ms 1.10% VecNorm_Seq 37ms 0.88% 74.66% 45ms 1.08% AbstractOneStepIvpOdeSolver::Solve 37ms 0.88% 75.54% 44ms 1.05% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 5ms 0.12% 75.66% 44ms 1.05% PetscMallocAlign 8ms 0.19% 75.85% 43ms 1.03% AbstractCardiacCell::SetVoltage (partial-inline) 42ms 1.00% 76.86% 42ms 1.00% TimeStepper::CalculateNextTime 8ms 0.19% 77.05% 41ms 0.98% VecAXPY 40ms 0.96% 78.01% 40ms 0.96% [libchaste_heart.so] 36ms 0.86% 78.87% 38ms 0.91% VecMDot_Seq 37ms 0.88% 79.75% 38ms 0.91% __ieee754_log_fma 0 0% 79.75% 37ms 0.88% VecDestroy 3ms 0.072% 79.82% 37ms 0.88% std::char_traits::length (inline) 0 0% 79.82% 36ms 0.86% VecDot_Seq 0 0% 79.82% 36ms 0.86% VecXDot_Seq_Private.constprop.0 20ms 0.48% 80.30% 35ms 0.84% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 35ms 0.84% 81.14% 35ms 0.84% __strlen_avx2 33ms 0.79% 81.93% 34ms 0.81% VecMAXPY_Seq 0 0% 81.93% 33ms 0.79% VecNorm_MPI 0 0% 81.93% 33ms 0.79% VecNorm_MPI_Default.constprop.0 29ms 0.69% 82.62% 32ms 0.77% AbstractParameterisedSystem::SetAnyVariable 0 0% 82.62% 32ms 0.77% CxxTest::RealWorldDescription::setUp 32ms 0.77% 83.39% 32ms 0.77% DistributedVector::Iterator::operator!= 0 0% 83.39% 32ms 0.77% PetscSetup::setUpWorld 0 0% 83.39% 32ms 0.77% PetscSetupUtils::CommonSetup 0 0% 83.39% 31ms 0.74% PMPI_Init_thread 0 0% 83.39% 31ms 0.74% PetscInitialize 0 0% 83.39% 31ms 0.74% PetscSetupUtils::InitialisePetsc 31ms 0.74% 84.13% 31ms 0.74% __memcpy_avx_unaligned_erms 0 0% 84.13% 31ms 0.74% ompi_mpi_init 0 0% 84.13% 29ms 0.69% VecCreate_MPI_Private 29ms 0.69% 84.82% 29ms 0.69% std::isinf (inline) 19ms 0.45% 85.27% 26ms 0.62% TimeStepper::AdvanceOneTimeStep 2ms 0.048% 85.32% 25ms 0.6% 0 0% 85.32% 25ms 0.6% PetscMemcpy (inline) 3ms 0.072% 85.39% 25ms 0.6% __posix_memalign 21ms 0.5% 85.90% 23ms 0.55% AbstractParameterisedSystem::GetAnyVariable 2ms 0.048% 85.94% 23ms 0.55% VecSetType 8ms 0.19% 86.13% 23ms 0.55% __GI___libc_malloc 0 0% 86.13% 22ms 0.53% orte_init 1ms 0.024% 86.16% 21ms 0.5% VecCopy_Seq (partial-inline) 21ms 0.5% 86.66% 21ms 0.5% [libm.so.6] 21ms 0.5% 87.16% 21ms 0.5% __memset_avx2_unaligned_erms