File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110749ms, 91.73% of 120735ms total Dropped 1121 nodes (cum <= 603.67ms) flat flat% sum% cum cum% 0 0% 0% 120721ms 100% __libc_start_call_main 0 0% 0% 120721ms 100% __libc_start_main_impl 0 0% 0% 120721ms 100% _start 0 0% 0% 120719ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120719ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120719ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120719ms 100% main 0 0% 0% 120682ms 100% AbstractConvergenceTester::Converge 0 0% 0% 120682ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120682ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120682ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120682ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120682ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0025% 0.0025% 119417ms 98.91% AbstractCardiacProblem::Solve 9ms 0.0075% 0.0099% 118597ms 98.23% AbstractDynamicLinearPdeSolver::Solve 2ms 0.0017% 0.012% 66861ms 55.38% LinearSystem::Solve 3ms 0.0025% 0.014% 66386ms 54.98% KSPSolve 16ms 0.013% 0.027% 66383ms 54.98% KSPSolve_Private 15ms 0.012% 0.04% 65939ms 54.61% KSPSolve_SYMMLQ 232ms 0.19% 0.23% 42775ms 35.43% AbstractCardiacTissue::SolveCellSystems 3ms 0.0025% 0.23% 37751ms 31.27% PCApply 2ms 0.0017% 0.24% 37739ms 31.26% PCApply_BJacobi_Singleblock 2ms 0.0017% 0.24% 34972ms 28.97% KSPSolve_PREONLY (partial-inline) 1ms 0.00083% 0.24% 33801ms 28.00% PCApply_ICC 8ms 0.0066% 0.25% 33800ms 28.00% MatSolve 33327ms 27.60% 27.85% 33792ms 27.99% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1327ms 1.10% 28.95% 32775ms 27.15% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00083% 28.95% 32560ms 26.97% KSP_PCApply.lto_priv.18 6892ms 5.71% 34.66% 28419ms 23.54% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0066% 34.66% 22049ms 18.26% MatMult 210ms 0.17% 34.84% 22041ms 18.26% MatMult_SeqAIJ (partial-inline) 21541ms 17.84% 52.68% 22037ms 18.25% MatMult_SeqAIJ_Inode (inline) 1975ms 1.64% 54.31% 14636ms 12.12% CardiacNewtonSolver::Solve 300ms 0.25% 54.56% 9135ms 7.57% AbstractCardiacTissue::UpdateCaches (inline) 4370ms 3.62% 58.18% 8664ms 7.18% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2058ms 1.70% 59.89% 8641ms 7.16% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1142ms 0.95% 60.83% 7914ms 6.55% BidomainSolver::SetupLinearSystem 1083ms 0.9% 61.73% 7437ms 6.16% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5ms 0.0041% 61.73% 7258ms 6.01% KSP_PCApply (partial-inline) 7ms 0.0058% 61.74% 6618ms 5.48% KSPConvergedDefault 6070ms 5.03% 66.77% 6070ms 5.03% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 4004ms 3.32% 70.08% 4069ms 3.37% __ieee754_log_fma 0 0% 70.08% 3571ms 2.96% boost::numeric::ublas::norm_inf (inline) 2415ms 2.00% 72.08% 3571ms 2.96% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.08% 3571ms 2.96% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.08% 3571ms 2.96% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0058% 72.09% 3491ms 2.89% MatNullSpaceRemove 3260ms 2.70% 74.79% 3260ms 2.70% __memcpy_avx_unaligned_erms 0 0% 74.79% 3211ms 2.66% PetscMemcpy (inline) 23ms 0.019% 74.81% 3206ms 2.66% std::pow (inline) 372ms 0.31% 75.12% 3179ms 2.63% __pow 1740ms 1.44% 76.56% 2853ms 2.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 362ms 0.3% 76.86% 2798ms 2.32% __ieee754_pow_fma 23ms 0.019% 76.88% 2787ms 2.31% VecCopy 2776ms 2.30% 79.18% 2776ms 2.30% ddot_ 3ms 0.0025% 79.18% 2759ms 2.29% VecCopy_Seq (partial-inline) 16ms 0.013% 79.19% 2617ms 2.17% VecAXPY 5ms 0.0041% 79.20% 2601ms 2.15% VecAXPY_Seq 2584ms 2.14% 81.34% 2584ms 2.14% daxpy_ 6ms 0.005% 81.34% 2249ms 1.86% VecDot 2ms 0.0017% 81.34% 2243ms 1.86% VecDot_Seq 2ms 0.0017% 81.35% 2241ms 1.86% VecXDot_Seq_Private.constprop.0 3ms 0.0025% 81.35% 2118ms 1.75% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 81.35% 2041ms 1.69% VecMDot 18ms 0.015% 81.36% 2039ms 1.69% VecMXDot_Private 2003ms 1.66% 83.02% 2014ms 1.67% VecMDot_Seq 32ms 0.027% 83.05% 1762ms 1.46% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1587ms 1.31% 84.36% 1647ms 1.36% exp_inline (inline) 1461ms 1.21% 85.57% 1461ms 1.21% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 5ms 0.0041% 85.58% 1443ms 1.20% VecMAXPY 0 0% 85.58% 1441ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1431ms 1.19% 86.76% 1438ms 1.19% VecMAXPY_Seq 1182ms 0.98% 87.74% 1182ms 0.98% __memset_avx2_unaligned_erms 0 0% 87.74% 1171ms 0.97% PetscMemzero (inline) 10ms 0.0083% 87.75% 1152ms 0.95% boost::numeric::ublas::matrix_assign (inline) 208ms 0.17% 87.92% 1134ms 0.94% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.92% 1109ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.92% 1109ms 0.92% CuboidMeshConstructor::Construct 2ms 0.0017% 87.92% 1109ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 817ms 0.68% 88.60% 1068ms 0.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.60% 1061ms 0.88% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.60% 1061ms 0.88% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.60% 1061ms 0.88% boost_numeric_ublas_abs (inline) 1061ms 0.88% 89.48% 1061ms 0.88% std::abs (inline) 0 0% 89.48% 1012ms 0.84% VecDuplicate 0 0% 89.48% 1001ms 0.83% Element::Element 1ms 0.00083% 89.48% 982ms 0.81% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.48% 938ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 4ms 0.0033% 89.49% 910ms 0.75% BidomainAssembler::ComputeMatrixTerm 4ms 0.0033% 89.49% 893ms 0.74% boost::numeric::ublas::c_matrix::c_matrix (inline) 10ms 0.0083% 89.50% 881ms 0.73% VecScale 3ms 0.0025% 89.50% 871ms 0.72% VecScale_Seq 13ms 0.011% 89.51% 866ms 0.72% PetscMallocA 866ms 0.72% 90.23% 866ms 0.72% dscal_ 8ms 0.0066% 90.23% 853ms 0.71% PetscMallocAlign (partial-inline) 841ms 0.7% 90.93% 841ms 0.7% [libchaste_heart.so] 3ms 0.0025% 90.93% 774ms 0.64% VecNorm 0 0% 90.93% 763ms 0.63% VecNorm_Seq 0 0% 90.93% 752ms 0.62% BidomainProblem::WriteOneStep 744ms 0.62% 91.55% 744ms 0.62% log_inline (inline) 2ms 0.0017% 91.55% 737ms 0.61% AbstractBidomainSolver::FinaliseLinearSystem 213ms 0.18% 91.73% 733ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.73% 677ms 0.56% AbstractFeAssemblerInterface::Assemble (inline) 1ms 0.00083% 91.73% 639ms 0.53% VecDuplicate_Seq