File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12741ms, 86.93% of 14657ms total Dropped 737 nodes (cum <= 73.28ms) flat flat% sum% cum cum% 0 0% 0% 14648ms 99.94% __libc_start_call_main 0 0% 0% 14648ms 99.94% __libc_start_main_impl 0 0% 0% 14648ms 99.94% _start 0 0% 0% 14645ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14645ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14645ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14645ms 99.92% main 0 0% 0% 14611ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14611ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14611ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14590ms 99.54% AbstractCardiacProblem::Solve 5ms 0.034% 0.048% 11277ms 76.94% AbstractDynamicLinearPdeSolver::Solve 40ms 0.27% 0.32% 8939ms 60.99% AbstractCardiacTissue::SolveCellSystems 95ms 0.65% 0.97% 5416ms 36.95% AbstractCardiacCell::ComputeExceptVoltage 98ms 0.67% 1.64% 4701ms 32.07% AbstractOneStepIvpOdeSolver::InternalSolve 158ms 1.08% 2.72% 4061ms 27.71% EulerIvpOdeSolver::CalculateNextYValue 942ms 6.43% 9.14% 3857ms 26.32% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1717ms 11.71% 20.86% 3529ms 24.08% __GI___exp 1ms 0.0068% 20.86% 3247ms 22.15% MonodomainProblem::WriteOneStep 5ms 0.034% 20.90% 3115ms 21.25% Hdf5DataWriter::PutVector 0 0% 20.90% 3066ms 20.92% H5Dwrite 5ms 0.034% 20.93% 3038ms 20.73% H5D__write 106ms 0.72% 21.66% 2696ms 18.39% AbstractCardiacTissue::UpdateCaches (inline) 773ms 5.27% 26.93% 2555ms 17.43% CellLuoRudy1991FromCellML::GetIIonic 0 0% 26.93% 1757ms 11.99% H5D__chunk_collective_write 10ms 0.068% 27.00% 1757ms 11.99% H5F_set_coll_metadata_reads 1572ms 10.73% 37.72% 1729ms 11.80% __ieee754_exp_fma 10ms 0.068% 37.79% 1537ms 10.49% H5FD_s3comms_uriencode 1ms 0.0068% 37.80% 1501ms 10.24% LinearSystem::Solve 0 0% 37.80% 1375ms 9.38% KSPSolve 7ms 0.048% 37.85% 1375ms 9.38% KSPSolve_Private 1ms 0.0068% 37.85% 1361ms 9.29% KSPSolve_CG 1ms 0.0068% 37.86% 1204ms 8.21% H5F_block_write 3ms 0.02% 37.88% 1203ms 8.21% H5PB_write 2ms 0.014% 37.89% 1200ms 8.19% H5FD_write 0 0% 37.89% 1200ms 8.19% H5F__accum_write 44ms 0.3% 38.19% 1192ms 8.13% 8ms 0.055% 38.25% 1174ms 8.01% H5D__chunk_cacheable 6ms 0.041% 38.29% 1123ms 7.66% H5D__mpio_select_write 0 0% 38.29% 999ms 6.82% PMPI_File_write_at_all 405ms 2.76% 41.05% 989ms 6.75% H5S_select_iterate 969ms 6.61% 47.66% 971ms 6.62% __GI_pwritev64 13ms 0.089% 47.75% 925ms 6.31% std::pow (inline) 84ms 0.57% 48.33% 912ms 6.22% __pow 111ms 0.76% 49.08% 827ms 5.64% __ieee754_pow_fma 398ms 2.72% 51.80% 810ms 5.53% MonodomainSolver::SetupLinearSystem 4ms 0.027% 51.83% 781ms 5.33% PCApply 1ms 0.0068% 51.83% 774ms 5.28% PCApply_BJacobi_Singleblock 0 0% 51.83% 715ms 4.88% KSPSolve_PREONLY 2ms 0.014% 51.85% 713ms 4.86% MatSolve 0 0% 51.85% 713ms 4.86% PCApply_ICC 700ms 4.78% 56.62% 711ms 4.85% MatSolve_SeqSBAIJ_1_NaturalOrdering 278ms 1.90% 58.52% 653ms 4.46% CellLuoRudy1991FromCellML::VerifyStateVariables 71ms 0.48% 59.00% 602ms 4.11% H5D__chunk_set_sizes 1ms 0.0068% 59.01% 539ms 3.68% MatMult 537ms 3.66% 62.67% 538ms 3.67% MatMult_SeqAIJ 1ms 0.0068% 62.68% 474ms 3.23% KSP_PCApply.lto_priv.7 58ms 0.4% 63.08% 422ms 2.88% H5S_mpio_space_type 394ms 2.69% 65.76% 394ms 2.69% log_inline (inline) 2ms 0.014% 65.78% 390ms 2.66% KSPConvergedDefault 0 0% 65.78% 309ms 2.11% KSP_PCApply 296ms 2.02% 67.80% 298ms 2.03% exp_inline (inline) 119ms 0.81% 68.61% 255ms 1.74% TimeStepper::TimeStepper 21ms 0.14% 68.75% 187ms 1.28% H5VM_chunk_index 8ms 0.055% 68.81% 184ms 1.26% ompi_datatype_destroy 180ms 1.23% 70.03% 180ms 1.23% [libchaste_heart.so] 152ms 1.04% 71.07% 179ms 1.22% AbstractOneStepIvpOdeSolver::Solve 46ms 0.31% 71.39% 179ms 1.22% __GI___libc_malloc 108ms 0.74% 72.12% 178ms 1.21% top12 (inline) 7ms 0.048% 72.17% 177ms 1.21% MPI_Type_free 153ms 1.04% 73.21% 174ms 1.19% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 37ms 0.25% 73.47% 170ms 1.16% __GI___libc_free 131ms 0.89% 74.36% 166ms 1.13% _int_malloc 39ms 0.27% 74.63% 163ms 1.11% std::__cxx11::basic_string::basic_string 10ms 0.068% 74.69% 159ms 1.08% ompi_info_register_framework_params 93ms 0.63% 75.33% 156ms 1.06% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 51ms 0.35% 75.68% 156ms 1.06% ompi_datatype_release_args 155ms 1.06% 76.73% 155ms 1.06% std::isinf (inline) 9ms 0.061% 76.80% 145ms 0.99% ompi_datatype_create 141ms 0.96% 77.76% 141ms 0.96% ddot_ 138ms 0.94% 78.70% 138ms 0.94% TimeStepper::CalculateNextTime 50ms 0.34% 79.04% 133ms 0.91% _int_free 1ms 0.0068% 79.05% 131ms 0.89% Hdf5DataWriter::PutUnlimitedVariable 3ms 0.02% 79.07% 128ms 0.87% PMPI_File_set_view 28ms 0.19% 79.26% 119ms 0.81% AbstractCardiacCell::SetVoltage (partial-inline) 17ms 0.12% 79.38% 118ms 0.81% H5S_set_version 0 0% 79.38% 111ms 0.76% VecDuplicate 4ms 0.027% 79.40% 111ms 0.76% VecDuplicate_MPI 53ms 0.36% 79.76% 109ms 0.74% H5S_hyper_add_span_element 11ms 0.075% 79.84% 103ms 0.7% std::char_traits::length (inline) 102ms 0.7% 80.53% 102ms 0.7% __ieee754_log_fma 48ms 0.33% 80.86% 101ms 0.69% H5VM_array_calc 99ms 0.68% 81.54% 99ms 0.68% __strlen_avx2 98ms 0.67% 82.21% 98ms 0.67% __memcpy_avx_unaligned_erms 97ms 0.66% 82.87% 97ms 0.66% H5VM_chunk_index_scaled 1ms 0.0068% 82.88% 95ms 0.65% PMPI_Type_create_resized 4ms 0.027% 82.90% 94ms 0.64% VecNorm 1ms 0.0068% 82.91% 94ms 0.64% VecTDot 73ms 0.5% 83.41% 92ms 0.63% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0068% 83.41% 90ms 0.61% ompi_datatype_duplicate 1ms 0.0068% 83.42% 89ms 0.61% VecTDot_Seq 1ms 0.0068% 83.43% 88ms 0.6% VecXDot_Seq_Private.constprop.0 0 0% 83.43% 84ms 0.57% VecNorm_Seq 84ms 0.57% 84.00% 84ms 0.57% [libm.so.6] 2ms 0.014% 84.01% 82ms 0.56% H5Pcreate 73ms 0.5% 84.51% 81ms 0.55% AbstractParameterisedSystem::SetAnyVariable 6ms 0.041% 84.55% 79ms 0.54% H5P_create_id 56ms 0.38% 84.94% 79ms 0.54% TimeStepper::AdvanceOneTimeStep 31ms 0.21% 85.15% 78ms 0.53% __libc_calloc 77ms 0.53% 85.67% 77ms 0.53% std::vector::operator[] (inline) 30ms 0.2% 85.88% 76ms 0.52% ompi_datatype_set_args 48ms 0.33% 86.20% 75ms 0.51% H5SL_search 75ms 0.51% 86.72% 75ms 0.51% asuint64 (inline) 31ms 0.21% 86.93% 74ms 0.5% H5S__hyper_rebuild